Syngnathoides biaculeatus (alligator pipefish): 133511805
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Entry
133511805 CDS
T09681
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a
KO
K16578
CLIP-associating protein 1/2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133511805 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133511805 (clasp1a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133511805 (clasp1a)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
133511805 (clasp1a)
BRITE hierarchy
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
Adaptin_N
Cnd1
Sec7-like_HUS
MMS19_N
MMS19_C
ParcG
Motif
Other DBs
NCBI-GeneID:
133511805
NCBI-ProteinID:
XP_061696739
LinkDB
All DBs
Position
14:4250719..4406606
Genome browser
AA seq
1529 aa
AA seq
DB search
MESNMESCLAQVLQKDVGRRLQVGQEIVDYILDKEKSHDLEQDQTALDKMVDGIASSWVN
SSNFKVALLGLDLLSALVTRLEERFRAHVGTALRSLIDRLGDAKDQVREQDQALLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMSCLVEIYRHVGERVRMDISKKGLPQSRLNVIFSKFDEVQISGNMISSSCSDK
NFEDEDSVDGGRSSSSSSSKAPPSGKRSILTARRPSSATSAKATGKEPAAGAVDEVDFIK
SFEDVPSVQIYSNRELEEHMTKIRDVLSDDKHDWEHRVVALKKVRSLMLAGAAEYEGFPQ
QLRLLEAPLKLSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESAMPILLNLVPNSAKI
MATSGMAAIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLERHV
AVLTETIRKGIHDADSDARSIARKCYWGFHGHYSREAEHLFQALESTYQKALQTHLKSSD
SIVSLPQSDRSSSSSQESLNRPPSVKTVIGGSIARTKLVSTRMPIITSSLQRSRSDVDVN
AASSAKSRVSIVPTSSAFSSAAALPPGSYASLGRVRTRRQSSGSASGASSSAVDSRGRSR
AKVVSQSQRSRSANPISAGSRSSSPGKLLGHSSYGRIPRAAISASSTPADKRSRIPRSQG
CSRETSPSRMGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLASRRHSRSTSALT
ADPHGQSERYGLIHQARISASVNAMRVLNTGTEVEAAVADALRKPMRRRYESPGIYSDDD
ANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKGQ
RILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVTVHRDDLQDWLFVLLTQLLKK
MGADLLGSVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLA
RQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALP
KTFQDGATKLLHNHLKNSSNAGSSVGSPSNFIGRVPPRHTPNRTSPLTSPTNCSHGGMSP
SVMEYDTENMNADDIYSSLRGVTEAIQSFSYRSQEDLNESIRREGKRDDAAGREGIASTP
GSEARLGLDVPEGGRTALDNKTSLLNTPSPRSFSGPRIREFAPYGHGETICTYDKSALKE
AVFDDDVEQFRDCQRNESGENTVMLSVGQDNSDLVADLLKELSNHNERSEERKSALVELL
KITREDSLAVWDEHFKTILLLLLETLSDKDHTIRALALRVLKEILKNQPARFKNYAELTI
MKTLEAHKDSHKEVVRAAEDAASTLAASIHPEQCVKVLCPIVQTADYPINLAAIKMETKV
IERITKDSLIQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGS
KMKLLNLYIKRAQTTNSNSSSSSDVSCHS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaacatggagagctgcctagcccaggttctacagaaagatgtaggccgtcgt
cttcaggtggggcaagagattgtcgactacatcttggacaaggagaagtctcatgacctt
gagcaggatcagactgctcttgataagatggttgatggcattgccagctcctgggtgaac
tccagcaacttcaaggtagctctgctcggcttggatctcctgtctgctttagtgacaagg
ttagaagagagattccgggcccatgtgggaacagctctgcgtagtcttatcgatcgattg
ggagatgccaaagaccaagtaagagaacaagaccaagcactgctacttaagatcatggag
caagctgcatctccacagtatgtgtgggaccgaatgctgggaggcttcaaacataagaac
aacaggaccagggaaggagtctgcctttgccttattgccacattgaatatgtacggagct
caaggcttgacgctcagtaagattgtcccccacatatgtaacctgctgggagatcccaca
agccaggtacgagatggggctatgagttgtttggtggagatctaccgacacgtgggtgag
agggtgaggatggatatcagcaagaagggcctccctcagtcacggttgaatgtaatcttc
agcaaattcgacgaggttcaaatatctggtaacatgatctcctcttcctgctcagataag
aactttgaagatgaggactcagttgatggaggccggtcctcctcctcatcatcatccaaa
gcacctcctagtggcaagaggtctatactgactgcgagaagaccaagctcagcaacctca
gcaaaggccacaggtaaagagccagctgctggggctgttgatgaagtggattttataaaa
tcttttgaagatgtgccctccgtccagatttactctaacagagagctggaagaacacatg
acaaaaatcagagacgttctgtcagatgacaagcacgactgggagcacagagtggtagca
ctgaaaaaggttcgctcgttaatgctggctggcgcagcggagtatgagggattccctcag
cagctgcgtttgttggaggcaccgctcaaactatcggcgaaagatctacgctcccaggtg
gtccgtgaggcctgcatcacactaggacatttatcatcactgctgggtaacaagtttgac
catggagcagagagtgccatgcctatactgttgaaccttgtgcccaatagtgcaaaaatc
atggccacatctggaatggctgccatccgccttatccttaggcatacgcactatccacgt
cttatccccatcattacaagtaactgcacttctaaatcagtcgcagtcagacgacgctgt
tatgaatttttagacctaatgctacaagagtggcacaccaatacactggaaaggcatgtg
gctgttttgactgagaccatcaggaaaggcatacatgatgctgactcagacgccagatcc
attgcaaggaagtgttattggggcttccacggtcactatagccgagaggcagaacatctc
ttccaagcactggagtctacatatcagaaagcgctccagactcatttaaagagttcggac
agcattgtctctctaccccagtcagatcgttcctcatcgtcgtctcaggagagcctaaac
cgacctccgtctgtgaagacggtcattggaggcagcatagcaaggactaaactggtgagc
acccggatgcctattataacgagttccctccagcgttcacgaagcgacgtcgatgtaaat
gctgcctccagcgccaagtcaagggtgtcaattgtgcctacatcttcggcattcagctca
gcagctgcccttccccctggatcctatgcatctttaggtcgtgttcgtaccagaagacaa
agctcaggtagtgcaagcggagctagttcttcagcggtggacagtagaggacggagtcga
gctaaagtggtgtctcaatctcagcgatccagatcggccaatcccatcagtgctggcagt
cgctccagctccccaggcaaacttcttgggcacagcagctatggtcggatccctcgggca
gcaatatctgcttccagcacaccagctgacaaacgtagcaggatccctcgcagccaaggg
tgcagcagagagacgagtccgagtcgaatgggcttagcccggagccgcataccccgccct
agcatgagtcagggttgcagtcgcgacactagtcgcgagagcagccgtgacaccagccct
gctcgcggctttactcctctggcttcccgacggcattctcgttcaaccagtgctctcaca
gctgacccccatggccagtcagaacgttatggtttgattcaccaagctagaatctcagca
tcagtcaacgctatgagggttcttaacactggcactgaagtggaagcagcagttgctgat
gctctgaggaagccaatgaggcgacgatatgaatcaccagggatatactccgatgatgat
gccaacagcgatgcctccagtgcctgctcagaacgttcttatggctcaagaaatggcggc
atccctcattatcttcgccagactgaggatgtcgcagaggtcctgaaccactgtgccagc
tccaattggtcagagcgtaaggagggacttctgggtttgcagaatctcctcaagggtcaa
agaatactgagccgagtggagctgaagagactttgtgaaatcttcacaagaatgtttgca
gatccacatagcaagagagtgttcagcatgttcctagagaccttagtggattttgtcact
gtacatcgcgacgacttgcaggactggctgtttgtccttctcacgcaactgctaaagaag
atgggagcagacctacttggctcagtccaagctaaagtccaaaaggccctggatatcaca
agggagtctttcccatttgaccaacagttcaatatattgatgagattcattgtcgatcag
acacagacaccaaacctcaaggtaaaggttgcgattttgaagtatattgagtctttggca
cggcagatggacccaacagactttgtcaactccagtgagactcgcctggctgtatcacgt
atcatcacctggaccactgaacccaaaagctcagatgtcagaaaggcagcccaggtggtg
ctgatatcattgtttgagctgaacacaccggagtttactatgctgctgggagctctgccc
aagacgttccaggatggcgccaccaaattattgcacaaccacttgaagaactctagtaat
gccggtagcagtgtgggatcaccaagcaacttcattgggcgtgtgccacctcgccacaca
cccaatcgaaccagcccactcacctctcctactaactgctcacatggaggaatgtctcca
agtgtgatggagtatgacactgagaacatgaacgcggacgacatttacagctcactacgt
ggtgtcactgaggccatccagagctttagctaccgcagccaggaggacctgaatgagtca
ataagacgggagggcaagagagatgatgcagctggcagagaaggaattgcgtcaacccct
ggttctgaagctcgcctaggcttggacgtaccggaagggggtcgaactgctttggacaac
aagacttcactgctaaatacaccatcaccgcgctccttctctgggccacgaattcgggag
tttgcgccttatggccatggagaaaccatctgtacctatgacaagagtgcccttaaggag
gctgtttttgatgatgatgtggagcagtttcgtgactgccaacgtaacgaaagtggtgaa
aacacggtgatgctctctgttggtcaggacaactccgacttggttgccgatctgcttaag
gagttgtccaatcacaatgagcgctctgaagaacgtaaaagtgccctggtggagcttctg
aagatcacacgagaagacagcctggctgtgtgggatgaacattttaaaactattctcctc
ctccttctggagacactaagcgataaagatcataccatccgagccttggcactgcgtgtc
ttgaaagaaatattaaagaatcagccagcccgattcaagaactatgcagagctaaccatc
atgaagaccttggaagcccataaagattctcacaaagaggtggtgcgtgcggccgaggac
gccgcttcgacattggccgcatccatccatccggaacagtgtgtcaaggtgctgtgtcca
attgtacagacagcagattacccaatcaacctggctgccatcaagatggaaacaaaagtc
attgaacgcatcactaaagactctctaatacagttgctggtggacatcatcccaggactc
ctgcagggttatgacaacacagagagcagcgttcgcaaagccagcgttttctgtctggtg
gcaatatactctgttatcggcgaggagctcaagccccacctggcacaactcacaggcagt
aagatgaaattactgaatctgtacatcaagcgtgcccagaccacaaacagcaatagcagc
agttcctcggatgtctcctgtcacagttaa
DBGET
integrated database retrieval system
