Syngnathoides biaculeatus (alligator pipefish): 133512134
Help
Entry
133512134 CDS
T09681
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
133512134 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133512134 (xrcc5)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
133512134 (xrcc5)
BRITE hierarchy
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
DUF6005
Motif
Other DBs
NCBI-GeneID:
133512134
NCBI-ProteinID:
XP_061697461
LinkDB
All DBs
Position
14:complement(21717763..21738367)
Genome browser
AA seq
753 aa
AA seq
DB search
MSKSFHVLCMDVGFSMSNSFPGEESPFELAKQVVQKFVQRQVFAEVKDELALVLFGTEST
KNPLAQDGQYQNITVHRNLMVPDFELLEEIENQVHPENQQADWLDALVVCMDLLQTGIKE
KRSDQLNIYLLTDLSVEANSEQVDVIVENLKKANITLQFFLPFPAEDESMDEAGDASRGG
PGAPGSGKGLSGQQRTGLEMVKHIMDCLDEQDGLDQIYTLRNAIEGLCMFKQIERRPTAW
PCQLTIGSALSIRIVGFKAVTEEKLKKMWVTVDAQSHEREHVKKETVFCLDDDNETEVQK
DDIIQGFCYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTNQNLVLRHSFMGTQAIKIFAP
GNDEHAGVALSALVRALDELKMVAIVRYAYDRRCNPQIGAAFPCIKLNYECLIYVQLPFM
EDLRHYTYASLNSKKFSPSDSQLQAVDSLIDSMMLVDKDEDGELKDLVKVHHIPNPEFQR
LFQCLHHRAVSPGTALPPMEPWLKAVLDRPDVIKERCQAPLEEVKKMFPLKVVEKKKMLK
TSAQLFGRDSEQPDAKKAKGDTAEEAEEEEYNLADISEGSVTSVGSVNPARDFRILIKQK
TLTFEEACEQLTHRIEQLLGNKNTQYYMKSITCIQAFREESVKLGKADLYNSYLRLLKGS
IPSRGLEVFWDLLVQGSISLIGQDEVEGSSVSKNEVAQFLLPDEKEEEPAATMADDTGDV
DDLVLEVLLALRVLSIPVDIHFFTNCSEVTRRK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatcctttcatgtgctgtgcatggatgttggattttccatgtccaactcgttc
ccgggtgaagagtctccattcgaactcgccaaacaagttgttcagaagtttgtccaacgt
caggtgtttgccgaggtcaaagacgaattggctttggttctgtttggaacagagtccacc
aagaacccactggctcaagatggccagtaccagaacatcactgtgcaccgcaacctaatg
gtacctgactttgagctcttggaggaaatcgagaatcaggtccacccggagaatcaacag
gccgactggttggacgcccttgtggtttgcatggatcttcttcaaacaggaataaaggaa
aaacgttctgatcaacttaacatctatttactgactgacctcagtgttgaagcgaattcg
gagcaggtggatgtcattgttgaaaacctgaagaaagcgaacataacacttcagttcttt
ttgcccttccctgctgaagatgaatcaatggatgaagcaggcgatgcgagcagaggagga
ccgggcgcacctggctcgggcaaaggcctgtccgggcaacagaggactggactggagatg
gtcaaacacatcatggactgcttggatgagcaggatggtcttgatcagatttacacactc
aggaatgccattgagggcctgtgtatgttcaagcaaatcgagagaagacccacggcgtgg
ccctgtcagctgaccatcggtagcgctctgtccatccgcatcgttggcttcaaagctgtg
accgaagagaaactgaagaaaatgtgggttacggtagacgctcaaagccacgagagagag
cacgtgaagaaagagaccgtcttctgtctggatgatgacaatgagacggaggtgcagaag
gacgacatcatccaaggtttttgctacgggagtgatattgttcctttctccaaagtggat
caagagcagatgaaatacaaacacgacgggaagtgttttgctgttttaggctttactaac
caaaacctggttcttcgccactccttcatgggaactcaggccatcaagatttttgctcca
ggcaacgacgagcacgcaggggtggcgctatccgctctcgtccgggcgctggatgagctc
aaaatggtggccattgttcgttacgcctacgaccggcgatgcaaccctcaaataggagca
gctttcccttgcatcaagctgaactatgagtgtcttatatacgtccaactgcccttcatg
gaagacctccgacactacacatatgcttctctgaacagcaaaaaattcagcccctcggac
tcacagctacaggctgttgactctctcattgactccatgatgttggtggacaaagatgaa
gatggagaactcaaggacttggttaaagtacaccacattcccaatccagagttccagcgg
cttttccagtgcctgcatcatcgagctgtcagccctggcacggccctccccccaatggag
ccgtggcttaaagctgtactggaccgccccgatgtcatcaaggagcgttgtcaagcgcca
ttagaggaggtgaagaaaatgtttcctctcaaggtggtggagaagaagaagatgctgaag
accagcgctcagctctttggaagagactctgaacagcccgatgccaagaaggcaaaggga
gacactgcagaggaggcagaggaggaggagtataatctggctgacatttctgaaggctct
gtgacttcggtcggaagtgttaatcccgctcgtgatttccgcatcctgatcaaacaaaaa
acgctaaccttcgaagaggcctgcgagcagctgactcacaggatagagcagttgctaggc
aacaagaacacacagtactatatgaaaagcatcacctgtatccaggccttcagagaggag
tctgtaaagctgggcaaggccgatctctacaatagctacctccggttgctgaaaggaagc
atcccaagtagggggttggaagtcttctgggacctgcttgttcaaggctccatttcgctt
attggccaagacgaggtggaaggaagctccgtctccaaaaatgaagtcgctcagtttcta
ctgcctgacgagaaagaagaagagccagccgcgacaatggcagatgacactggagatgtt
gacgacttggtccttgaggtccttttggcccttcgtgtcctctccatccctgtggacatt
catttcttcacaaactgcagtgaggtcaccagaagaaaataa
DBGET
integrated database retrieval system
