Syngnathoides biaculeatus (alligator pipefish): 133513966
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Entry
133513966 CDS
T09681
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133513966
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133513966
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
133513966
NCBI-ProteinID:
XP_061701076
LinkDB
All DBs
Position
16:complement(11894149..11945237)
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AA seq
465 aa
AA seq
DB search
MLMSTDVASIMLPVSRGIMDRERDIDTSAVPHTSGAGGPAAVRGMKRGDPEPDALAAAAL
TDLTGAECKRPRIDGTGSVIGDIGQNNEPLNPGFHGYTPHNQGSQDSTGAQDGLVAQPFA
AFPPPPPPQNGIAGTEFGPGTMFGAGGQGTAEVGAGANGNTTSTTINNNGKTEESSQGEA
AVQCGTGGTAAGGSGGDSSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFN
ERGSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEAL
STLPYAGWKLSPMVGAVYGPEIYAVPGFPYPSAAAAATTAAAAAAFRGAHLRGRGRPVYS
AVRAAVPQAAIPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAYRYTQPAAVTGATAAA
AAYSDSYGRVYTTDPYHALAPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctattatgctacccgttagtcgggggataatggac
cgagaaagagacatcgatacgtccgcggtgccgcatacgagcggagccggaggtccggcg
gcggtccgggggatgaagcgaggagaccccgaacccgacgctcttgcagccgctgccctg
actgacctgaccggggcggagtgcaaaagaccaaggatagatggcaccgggagtgttatt
ggcgacattggacagaacaatgagcccttaaatcctggtttccatggatacacacctcac
aatcaggggtcccaggattcaacaggagcacaggatggtttggtggctcaaccctttgca
gcattccctcctccaccccctccccagaatggaatagctgggacagaatttggccccggg
accatgtttggtgcagggggtcaaggtacagctgaggtaggcgctggtgcaaatgggaac
accaccagtaccaccatcaacaacaatggtaagactgaggagtcttcccagggggaggca
gctgtacagtgtggtactggagggacagcagcagggggatctggaggagactcgtcagag
gctaaagggacccccaaacgcctccatgtgtcaaacatcccattccgcttccgtgaccct
gacctcaggcagatgtttgggcaatatgggaagattctggatgtagaaatcattttcaat
gagaggggctcaaagggtttcggctttgtgacatttgagaccagcgcagatgcagagaaa
gcccgcgaaaagctccatggcacattggtggaaggtcgtaagattgaggtgaataatgcc
actgcaagggtgatgactaacaagaaaatggtcagcccctaccctaatggagaggctctg
agcacactgccctacgcagggtggaaattgagcccaatggtcggggctgtgtatggacca
gagatctatgcagtcccagggttcccctacccttcagcagccgcagcagccacgacagct
gccgcagcagctgcgttccgtggcgctcaccttcgcggtcggggtcggcccgtctacagt
gcggtgcgggcagcagtgcctcaggctgctatccccgcataccctggcgtggtgtatcag
gatgggttttacggcgccgcagacttatacggaggttaccctgctgccgccgccgcggcc
gccgccgctgcttatcgctacactcagcccgcagctgtaaccggagcaaccgcagcagct
gccgcatacagcgacagttatgggcgtgtttacacgacggacccctaccacgctttagcc
cctgctgctgctgcctacggagtgggagccatggccagtttatacagggcaggctacagt
aggtttgctccgtactaa
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