Syngnathoides biaculeatus (alligator pipefish): 133514980
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Entry
133514980 CDS
T09681
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133514980 (rbfox1)
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133514980 (rbfox1)
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
133514980
NCBI-ProteinID:
XP_061703130
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All DBs
Position
16:4440390..4625350
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AA seq
413 aa
AA seq
DB search
MQHPGGTCVALPNVDACPQLSCAALTFMYLQQANQDTPTPPDPSMAQTYTSAQFAPPPQN
GITTEFTASHPHPHPHSHPHSHQHPTPQDYSGVQASGSDHPLNVYQSTQSHSDQNGSDLS
NQTVTGTATQTDDPAQTDSHPTTQTVPESTDCKAQPKRLHVSNIPFRFRDPDLRQMFGQF
GKILDVEIIFNERGSKGFGFVTFEHSMDADRAREKLHGTVVEGRKIEVNNATARVMTNKK
AVNPYANGWKFNPVVSAIYSPEFYAVPGFPFPAASAAAAAAAYRGTHLRGRGRTVYNTFR
AAAPTPHIPAYGGVVYQDGFYGADIYGGYTAYRFAQPTAATAAAYSDSYGRVYAADPYNH
TFTPAATYSVGAMNAFTPLTDAKTRSHVDDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcccggaggaacatgtgtggcgttacccaacgtggatgcctgtccccagttg
tcctgcgccgccctcacctttatgtatttacagcaggctaaccaggacacaccaacaccc
ccagatccatccatggcccagacttacacatcagcccagtttgcccctcctccccagaat
ggcattaccaccgagttcacagcttcacacccccacccacatccacactcccatccacat
tcacaccagcacccaacacctcaagactattctggggttcaggcctctggcagtgaccat
ccactcaatgtgtaccaatctacacaaagccacagtgaccagaatggatcagacctcagc
aatcagacagtcaccggcacagccacacagacagatgatcctgcacagacagatagtcat
ccaacaacacagactgtacctgagagcacagactgcaaggcccagcccaaaaggcttcat
gtctccaacatccctttcaggttcagagacccagacctcaggcaaatgtttggccaattt
ggcaaaatcttagacgtggaaatcatcttcaacgagcgtggttccaagggttttggattt
gtaacattcgagcatagtatggacgccgacagggccagggagaaattacacggcactgtg
gttgaaggtcgtaaaatagaggtcaacaatgcaacagcccgagtaatgacaaataagaag
gctgtcaacccatatgcaaatggctggaagttcaatccagttgtcagtgccatttacagc
ccagaattctatgcagtgccaggatttcccttcccagcagccagtgcagcagcagcagca
gcagcctatagaggaacccacctacgaggtcgaggacggacggtctacaacacattcagg
gcagctgctccaactcctcacattccagcttatggaggtgttgtttaccaggatggattt
tatggtgcagatatttatggtggttacactgcctacagatttgcccagcctactgctgcc
acagcagctgcatacagtgacagttatggacgagtatatgctgccgatccctacaaccac
acattcactccagcagccacatacagcgttggtgccatgaatgcatttaccccgctgaca
gatgccaaaacacggagccatgttgatgacgttggacttgtgctgtcttccctccaggcg
agtatataccggggaggctatagccgttttgctccctattag
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