Shewanella bicestrii: CF168_11285
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Entry
CF168_11285 CDS
T05197
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbj01002
]
CF168_11285
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbj01011
]
CF168_11285
Peptidases and inhibitors [BR:
sbj01002
]
Cysteine peptidases
Family C82
CF168_11285
Peptidoglycan biosynthesis and degradation proteins [BR:
sbj01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CF168_11285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ASK69408
UniProt:
A0A220UMK8
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All DBs
Position
complement(2586296..2587972)
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AA seq
558 aa
AA seq
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MMPVSRLTLNPNTSNRSFSSLKRWPLGALLMGLSLAVIESYAAEPLVTAPLSVEAERVEQ
PALPPSAEVADPDTAVEQILGQTLLLSLADVSPVFSANYQQLIQWQHRALNNEEQLKLRQ
MQLQLDNYWQYLDAQAECTAPCLSAALIPKDTYFRAVVLKLKQLMALAESSSWETLILED
KLSPGQESPLIAPIAQRLFLLGFLAEMPSTASESVADEAALPVSELGSEPTIEPDIISPD
ATTHAGTVARTEQASTDNNSMPYDDELVRAIKNFQTQHGLQADGVIGKQTLYWLNQSPYA
RAKLLAKNTLRQQLFTRTLPASYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTPLLS
SHISSVVLNPPWRVPRTIVRRDIMPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELA
SSHFPYRLVQRPGAKNALGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVE
ELARWFQTHLVKDTRLWDKLTPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIY
HLEVEFTQAVPAAIFYIL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgtgagtcgattaacgctaaatcctaatacatccaaccgcagctttagttca
cttaagcgctggccactcggtgcattgttgatgggactttcgcttgcagtcatagaatcc
tacgccgccgaaccactggtaacagcacctttaagcgttgaagcagaaagggttgaacag
cccgctcttccgccttccgcagaagtcgctgacccagacactgcagttgagcaaattcta
gggcaaaccttactcttgagtcttgccgatgttagcccggtttttagcgccaattatcaa
cagttgatccagtggcaacatagggcgctgaataacgaggagcaattgaagcttcgccaa
atgcagctgcaattggataactattggcagtatcttgatgcccaagctgaatgcactgcg
ccatgcctatcggcagcactgatccctaaggatacgtattttcgcgctgtggtcctcaag
ttgaagcaattgatggcgttagcggaatcctcttcgtgggagacactcatcctcgaagat
aagctcagtccagggcaagagagcccgctcattgcgccgattgcacagcgccttttccta
ttaggttttctagcagagatgcctagcacggcttccgagtctgtagccgatgaagcagct
ttgccagtatctgaactaggatctgagccaaccattgagccagacatcatttcaccagac
gcaacaactcatgctggaacagttgcacggactgagcaggcttcaactgataacaattcc
atgccttatgatgatgaactggttcgcgcgatcaaaaactttcaaacccagcatggctta
caggcggatggggtgataggtaaacaaaccctgtattggcttaatcaatctccctatgct
cgggcaaagctgctggcgaaaaatacccttaggcagcagctttttactcgcaccttacct
gcaagctatctggtgataaacatccctgcatttgagctgcaattcgtcgaagcggggaag
gtgatccttaattcaaaagtaatagtgggcaaagcatcgcggccaacaccgctgctaagt
agtcatatctccagcgtggtgctcaatccaccgtggcgcgtaccgcgcaccatagtgcgg
cgcgatatcatgccccatatacgccaagatggtcattacctgcaggaccgcgggtttgat
gtttacgactatgacggcgcgcgagtcgaacattcgccgcaggagtggcaagagttagcg
tccagccattttccctatcgtttagtgcaacgccccggggcgaaaaacgccttaggtcga
tataaatttcatttcgacaacagttttagtgtgtatttgcacggaacttctgagccaagt
ctctttaaaaagaccgatagggccttatcatcgggttgcattcgggttgaaaaggtcgag
gagctggcccgctggtttcaaactcacttagttaaagatacgcgcctttgggacaaatta
acgcctaataccactcaatcccaatggtttgcgctgtcagataccatgcctgtctacacg
gtttattggacagcatggcttgatgatgctgggcaaattcaatatcgcaatgatatttat
cacttagaagttgagtttacccaggcggtgcctgcagcaattttttacattctataa
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