Shewanella bicestrii: CF168_20405
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Entry
CF168_20405 CDS
T05197
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
sbj
Shewanella bicestrii
Pathway
sbj01501
beta-Lactam resistance
sbj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CF168_20405
01503 Cationic antimicrobial peptide (CAMP) resistance
CF168_20405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbj02000
]
CF168_20405
01504 Antimicrobial resistance genes [BR:
sbj01504
]
CF168_20405
Transporters [BR:
sbj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CF168_20405
Antimicrobial resistance genes [BR:
sbj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CF168_20405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
ASK71049
UniProt:
A0A220USA3
LinkDB
All DBs
Position
complement(4666525..4669659)
Genome browser
AA seq
1044 aa
AA seq
DB search
MARFFIDRPIFAWVIALIIMLAGVLSIRSLPVSQYPSIAPPTVVISANYPGASAKIVEDS
VTQVIEQRMKGIDHLRYIASTSDSFGNASITLTFNAEADPDIAQVQVQNKLQGAMTLLPQ
EVQSQGVNVNKSSSGFLMVLGFVSTDGSLDKGDIADYVGANIQDPMSRVPGVGEIQIFGA
QYAMRIWLDPLKLTQYNLTSLDVVSAIRAQNAQVSAGQLGGTPSLPGQELNATVSAQSRL
QTPEQFRKIILKSDTSGANVFLGDVARVELGSESYAVESLYNGKPASGIAIKLATGANAL
DTAAAVRAKVEELRPFFPAGLDVVYPYDTTPFVEKSIEGVVHTLLEAIVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCATMLKPLKKGHGHIETGFFGWFNRGFDRLTNRYESSVAGIVKRSFRV
MMIYAALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTMKVLEKVSDHYLAE
EGVRSVFSVAGFSFAGQGQNMGIAFVGLKDWSEREAPGMDVQSIAGRAMGVFSQMKEAFV
FAFVPPAVIELGTANGFDMYLQDKNGQGHDKLVAARNQLLGMAAQNPNLVGVRPNGQEDA
PIYQLHIDHAKLSALGIEIANVNSVLATAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQPE
DLDTWYVRNNKGDMVPFSAFATGAWEYGSPRLERFNGLPAMNIQGATAPGFSTGAAMNIM
EDMVKQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVILV
VPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLIEATL
HAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFLGIFFVPLF
FVIVERIFSKREKKGKEEKPTSAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttttttattgatcgccccatctttgcgtgggtgatcgccttaatcattatg
ttggcgggggttctgtcgatccgatccctgccagtctcgcagtaccccagtattgcgcca
ccgacagtggtgatcagtgcgaactacccaggtgcatcggccaaaatcgttgaagactca
gtgactcaggtgattgagcaacgtatgaagggtatcgaccacctacgttatatcgcatca
accagtgatagctttggtaacgcttctattaccttgacctttaacgcagaagccgatccg
gatatcgcgcaggttcaggtacagaacaagttacagggcgcaatgactttgttaccacaa
gaggtgcaatctcaaggggttaacgttaacaagtcaagctctggcttcctgatggtactg
ggcttcgtttcgaccgacggttctttagataagggtgacatcgccgactatgtgggcgct
aacatccaagatcctatgagccgtgtaccgggcgtgggcgaaattcagattttcggtgcc
caatacgcgatgcgtatatggttagacccactgaaactgacccaatacaacctcaccagt
ttagatgtggtgagcgctatccgtgcgcaaaacgcgcaggtatctgcgggtcaactcggt
ggcacaccatcactgcctggacaagagctaaacgcgactgtatcggcacagagccgtcta
caaacgcctgagcaattccgcaagatcattcttaaatccgatacgtcgggtgcgaacgta
ttcttgggtgatgtggcgcgtgttgaactgggttcagaaagctatgcagtagagtctctg
tataacggcaaaccagcttcgggtatcgcgattaagctggcaaccggcgctaacgccctt
gatacggcggcagcagttcgcgctaaagttgaagagttacgtcccttcttccctgctggg
ttagatgtggtttacccctacgatacaacgccattcgttgagaaatcgattgaaggcgta
gtacacactctgcttgaagctatcgtactggtgtttgtcatcatgtacctcttcctgcag
aacttccgtgcgaccttaattccaacgatcgccgtgcctgtcgtattgttgggtaccttt
gcgattctgtcggcaacgggcttctccatcaacaccctcaccatgttcgctatggtgttg
gcgattggtctgctcgtggacgacgcgattgtggtggtggaaaacgttgagcgggttatg
gcagaagagggcctaagcccactcgaggcgacccgtaagtcgatggatcaaattactggc
gcgttagtcggtatcggtctgaccttgtcggcggtattcgtacctatggcgtttatgtcg
ggttctactggggttatttaccgtcagttctcgatcactatcgtttctgcgatggcgctg
tctgtgctggtggccttgattttaacacctgcactctgtgcgaccatgttaaaaccgttg
aagaaaggccatggccatatcgaaacaggtttctttggctggtttaaccgtggcttcgat
cgcttaaccaaccgttacgaatcgagcgtggctggcattgtgaagcgtagtttcagagtc
atgatgatttacgctgcgctagtcgtggcagtgggctggattttcatgcgcatgccaacg
gcattcttacctgatgaagaccaaggtatcttgttcacgcaggcaattttgccaaccaac
tctacccaagaaagcaccatgaaagtgttagagaaagtctctgatcactatctggcagaa
gagggcgtgagatcggtattcagcgtggcgggcttcagtttcgcgggtcaaggccagaac
atgggtattgccttcgttggcttgaaggattggtcagagcgtgaagcgccaggtatggat
gtgcaatccattgcgggccgcgcgatgggcgtattcagccaaatgaaagaagccttcgta
ttcgccttcgtaccgcctgcggtaatcgagctgggtacggctaacggtttcgatatgtac
ctgcaagataagaatggccaagggcacgacaagttagtcgcagcgcgtaaccaattgtta
ggtatggcggcacagaatccaaacctcgtgggcgttcgtccaaacggtcaggaagatgcg
ccaatctatcagttgcatatcgaccacgccaaactgagtgccttaggcattgagattgcg
aacgtgaacagcgtgctcgcaaccgcatggggtggctcttatgtaaacgactttatcgac
cgcggtcgtgtgaagaaagtttacgtacagggtgatgcgcaataccgtatgcaacctgaa
gacttagacacttggtacgtgcgtaacaacaagggcgacatggtgccattctcggccttc
gcaacgggcgcttgggaatatggttcacctcgtctagagcgtttcaacggtttacctgcc
atgaacattcaaggcgcaacggctcctggtttcagtactggtgcggcgatgaatatcatg
gaagacatggtgaagcagttgccaccaggctttggtatcgagtggaacggcttatcctat
gaggaacgtttatcgggtaaccaagcgccagcgctgtatgctctgtcgattttggtggta
ttcctcgtactggcggcgctttatgagagctggtctgtaccgttcgcagtaatcctagtg
gttccgctagggattatcggtgccctgctggcgatgaatggtcgtggcttgccaaacgac
gtgttcttccaggtgggtctgttgacgacggtcggtttggcgacgaagaacgccatcttg
attgtggaattcgccaaagaattctatgagaaaggtgcgggacttatcgaggcgacctta
catgcggtacgtgtgcgtttgcgtccaattctgatgacgtcactcgccttcggtctaggt
gttgtaccgttagcgattagtacaggtgtaggttctggtagtcagaacgccatcggtact
ggggtactcggcggtatgatgagttcgaccttcctaggtatcttcttcgtgccgttgttc
ttcgtgattgtggaacgtatctttagtaagcgcgagaagaaaggtaaagaagaaaagccg
acctcggcggagtaa
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