Shewanella benthica: SHEWBE_1981
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Entry
SHEWBE_1981 CDS
T06707
Name
(GenBank) 3-methylcrotonyl CoA carboxylase, beta subunit
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
sbk
Shewanella benthica
Pathway
sbk00280
Valine, leucine and isoleucine degradation
sbk01100
Metabolic pathways
Module
sbk_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SHEWBE_1981
Enzymes [BR:
sbk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
SHEWBE_1981
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GFIT
Motif
Pfam:
Carboxyl_trans
MdcE
Motif
Other DBs
NCBI-ProteinID:
SQH75947
UniProt:
A0A330M846
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All DBs
Position
SHEWBE:complement(1841510..1843117)
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AA seq
535 aa
AA seq
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MTQLSSRINSRSDEFKAKHEDMAALVEDLKLKLQQIELGGGIVARQRHLSRGKMLPRQRV
EKLLDPGSPFLELSQFAAYELYEDVIPAAGIIAGIGRVSGVECMIIANDATVKGGTYYPV
TVKKHLRAQEIASRCHLPCIYLVDSGGAYLPRQDEVFPDRDHFGRIFYNQAQMSAKGIPQ
IAVVMGLCTAGGAYVPAMADESIIVKKQGTIFLAGPPLVKAATGEEVTAEELGGAEVHTK
ISGVADHLAQNDDHALELARKAITRLNHQKTIVTQLSPVKPPKFDINELYGIVGTDLKKP
YDVREVIARVVDDSDFDEFKANYGNTLVCGFTRIHGYPIGIIANNGILFSESALKGAHFI
EICCQRKIPLLFLQNITGFMVGKKYEHEGIAKHGAKMVMAVSCAKVPKFTVIIGGSYGAG
NYGMCGRAFEPTMMWMWPNARISVMGGEQAAGVLATVKRDGLARKGVEWSDDEEQKFRAP
IVEQYDKEGHPYHASARLWDDGIIDPAQTRDVVGLALSAALNAPIEETKFGVFRM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaacttagcagtcgtataaattcccgcagtgatgaattcaaggcaaagcatgaa
gacatggcagccctggttgaagatcttaaactcaagctgcaacagattgaactgggcggc
gggatagttgcccgtcagcgccacctgtccaggggtaagatgttaccccgacaaagggtc
gagaagctgctcgaccccggctcgccgtttcttgagctctcccagttcgccgcctatgaa
ttatatgaagatgtcattcctgctgccggcattattgccgggataggccgtgttagcggc
gtcgaatgcatgatcatcgccaacgatgccacagtaaaaggcggcacttactatccagtc
acggttaagaaacacttgcgagcgcaggagattgccagtcgctgtcatctgccttgcatc
tatctggtcgattccggcggcgcctacctgccccgccaggatgaagtattcccggacaga
gaccatttcggccgcatcttctacaaccaggcacagatgtcagccaaaggtattcctcaa
attgccgtggtcatgggcttatgtaccgcaggtggcgcctatgtaccagccatggcggat
gagtccattatcgtcaaaaaacaaggcaccatcttcctcgccggaccacctctggtaaag
gcggcaaccggtgaagaggtcaccgcagaagagctcggcggcgccgaggtacacactaag
atctccggggttgccgatcatttggcgcaaaatgatgaccatgcattagagttggcacgt
aaagccattactcgtttgaatcatcagaagacaattgtaacccagctcagtccggtgaaa
ccgcctaagttcgatatcaatgagctctacggcatcgtcggcacagatctaaagaagcca
tacgatgtcagggaagtcatcgcccgcgtagtcgatgactcagatttcgatgagtttaag
gccaactacggcaacaccttagtctgtggcttcacccgtattcacggttatcccataggt
attatcgccaacaacggcatacttttttcggagtcggccctgaaaggtgcccactttatt
gagatctgttgtcagcgcaagatccctctcttgttcctgcaaaatatcaccggcttcatg
gtaggtaaaaaatacgaacatgaaggcatagccaaacacggtgccaagatggttatggca
gtgtcttgtgccaaggtgcctaaatttaccgtcatcataggtggcagttatggcgcgggg
aactacggcatgtgtggccgcgcattcgaacctaccatgatgtggatgtggcccaacgca
cgcatctctgtgatgggcggcgagcaggctgctggggtgttagccacggtgaaacgtgat
ggtttagcccgtaagggtgtcgaatggtcagatgatgaagagcaaaagttccgcgcgcct
atcgtcgagcaatacgacaaagagggtcacccctaccacgccagcgcacgcttgtgggat
gacggcattatcgacccggcacaaacccgggatgtggtgggtttagctttatctgccgcg
ctcaatgcgccgatagaagagaccaaatttggtgtgtttcgtatgtaa
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