Shewanella benthica: SHEWBE_3520
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Entry
SHEWBE_3520 CDS
T06707
Symbol
rmlC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sbk
Shewanella benthica
Pathway
sbk00521
Streptomycin biosynthesis
sbk00523
Polyketide sugar unit biosynthesis
sbk00541
O-Antigen nucleotide sugar biosynthesis
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01250
Biosynthesis of nucleotide sugars
Module
sbk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SHEWBE_3520 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SHEWBE_3520 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SHEWBE_3520 (rmlC)
Enzymes [BR:
sbk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SHEWBE_3520 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
SQH77483
UniProt:
A0A330M7Q3
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All DBs
Position
SHEWBE:complement(3398873..3399421)
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AA seq
182 aa
AA seq
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MKIIDTAIPDVKIIEPTVFGDERGFFMETWNQKKFEEFVTGKLTRFVQDNHSKSKKGILR
GLHYQTENTQGKLVRVVSGEVFDVAVDIRQDSPTFGKWVGEYLSAENKRQLWVPEGFAHG
FYVTSEEAEFVYKCTNYYHSESEVSIRWNDENLQIDWPLNGVPPLLSSKDIDACEFKFVG
KQ
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattattgatacagcaataccagatgttaaaatcatcgaaccaacagttttcggt
gatgagcgcggttttttcatggaaacctggaatcagaaaaagtttgaggaattcgttact
ggtaaactaactcggtttgtacaagataatcactctaaatccaagaaaggtatcttaaga
ggccttcattatcaaactgaaaatactcaaggtaaactcgtacgagttgtatctggtgag
gtatttgatgtggcagttgatattcgacaagattcacctacgtttggcaagtgggttggt
gagtatttatctgctgaaaataaacgccaattgtgggtgccagaaggctttgctcatgga
ttttatgtaacgagtgaagaggctgaatttgtatataaatgtactaattactatcattca
gagtcagaggtttcaattcgttggaatgatgaaaatcttcagattgattggcctctaaat
ggagttcctccattactttccagtaaggatattgatgcttgcgaatttaaattcgtgggt
aaacagtaa
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