Shewanella benthica: SHEWBE_3745
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Entry
SHEWBE_3745 CDS
T06707
Symbol
nifJ
Name
(GenBank) Pyruvate-flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
sbk
Shewanella benthica
Pathway
sbk00010
Glycolysis / Gluconeogenesis
sbk00020
Citrate cycle (TCA cycle)
sbk00620
Pyruvate metabolism
sbk00650
Butanoate metabolism
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01120
Microbial metabolism in diverse environments
sbk01200
Carbon metabolism
sbk01210
2-Oxocarboxylic acid metabolism
Module
sbk_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SHEWBE_3745 (nifJ)
00020 Citrate cycle (TCA cycle)
SHEWBE_3745 (nifJ)
00620 Pyruvate metabolism
SHEWBE_3745 (nifJ)
00650 Butanoate metabolism
SHEWBE_3745 (nifJ)
Enzymes [BR:
sbk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
SHEWBE_3745 (nifJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_21
Fer4_16
TPP_enzyme_C
Fer4
Fer4_10
Fer4_9
Fer4_6
Fer4_2
Fer4_8
Fer4_17
Fer4_15
Transketolase_C
Fer4_4
Fer4_13
HIP1_clath_bdg
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
SQH77708
UniProt:
A0A330M6E9
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All DBs
Position
SHEWBE:complement(3606214..3609855)
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AA seq
1213 aa
AA seq
DB search
MKTTEINSVTASMHTCDGNEAAAHIAYRVSEVCAIYPITPSSTMAELAEEWAAKDIRNIW
QGIPLIAAMQSEGGAAGTVHGSLQSGALTTTFTASQGLLLMLPNMYKIAGELTATVFHVA
ARSLAAQGLSIFGDHQDVMAARGTGFALLASSSVQESHDMAMVAHAATLEARIPFMHFFD
GFRTSHEVNKIALISDTDIRTMIDDKLVRAHRERGLSPNKPFIRGTAQNPDVYFQGRETV
TVFYNKTPEIVQACMDKLGDITGRYYKLIEFYGDAAADRVIIAMGSGIETIRETVDALNR
VGEKVGLIQVRLYRPLSAEYLLAALPKTVNKIAVLDRTKEPGANGDPLYQDILTSLVDSY
SEQDNLAQMPMLVAGRYGLSSKEFTPAMVKSVFENLSKDKPKKHFTLGIIDDVCHSHLEF
DASYDIESKDVVRAIFYGLGADGTVGANKNTIKIIGEDADYFAQGYFVYDSKKSGSQTES
HLRFGKKAINSPYLIQSANFIACHQATFVDTTDMLAKATENAVFLLNTQASVDKVWDTLP
AKMQSQLIEKKMSMHVIDAYKVGEETGMGKRINTIMQTCFFALSGVLEKDVAIDKIKKSI
VKTYAHKGPKVIEKNFAAVDHTLAHLEEVKIPASVTAKVINRPVVDDKAPDFVKQVTAKM
MAGKGDLIPVSMLPVDGTYPSGTTQWEKRDIALQIPVWEETACIQCGNCSIVCPHAAIRA
KFYDKSLLDTAPDGFKSHSITARGFPDTRYTLQVYAQDCTGCTLCVDVCPMVIQEATDTS
PEVKAINMQPKGPYMEQAKKDLDFFTSIPYNDRSRVDFSHVRGAQFLQPLFEFSGACSGC
GETPYLKLMSQLFGDRLMIANATGCSSIYGGNLPTTPWAKNDAGRGPAWANSLFEDNAEF
GFGFRLAAIKQQEMAKQLLVRISQDPQANLKPELVDKLLNCEQQTESEIQAQIKRVDELK
IELEKHETEDGLNLTSVADQLIRRSIWIVGGDGWAYDIGSSGLDHVLASGADVNVLVMDT
EVYSNTGGQMSKSTPLGAVAKFAASGKQTTKKDVAMQAISYNNVYVARIALGGDPQQTLL
AMREAEAYKGPSLIIAYSHCIAHGIDMEKGLRQQQLAVKSGHWPLFRYNPGLREVGENPF
SLDSLRPSISLKEYRSHEARFTMLIRSDPELAESLTKRAQHVVERRWKLYEEIASRSGGE
VAAHVEVDLEDIH
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacagaaataaactcagtcacggcttcgatgcacacctgtgatggtaatgag
gccgcggcccatattgcctatcgtgtcagtgaagtatgtgccatctatccgattacgccg
tcttcgaccatggcggagctcgccgaagaatgggcggctaaagatattcgtaatatctgg
caaggcatcccacttatcgccgcgatgcagagcgaaggtggcgcggccggtactgtgcat
ggctcactgcaaagtggcgccctgaccaccacatttacggcttcacaaggcttactgctg
atgttgccgaacatgtataaaattgccggtgagctaaccgcgacggtattccatgttgcc
gcgcgttcattggcggcccagggcctatctatctttggtgatcatcaggatgtgatggcg
gcgagaggcacaggcttcgcgctattagcatcatcttcggtgcaagagtcccacgatatg
gcgatggtggctcacgccgccacgttagaggcgcggatccccttcatgcacttcttcgat
ggcttcagaacctcccacgaagtgaataaaattgcgctgattagtgataccgatattcgc
actatgatcgatgacaaacttgtcagagcccatagagagcgaggtctgagcccaaataag
ccctttatccgcggtacggcgcaaaatcctgatgtttattttcagggccgtgaaacggtg
accgtgttttacaataagacgcccgaaatcgtacaggcttgcatggataaactcggtgat
atcaccggtcgttactataaactgatagagttttatggtgatgcagccgctgatcgggtg
atcatcgccatgggctcaggtatcgaaaccatcagagaaacagtcgacgccttaaacagg
gtgggtgaaaaagtgggtctgatacaggtgagactgtaccgtccattgagtgctgagtat
ctgcttgcggctctgccaaagacggttaacaagatagctgtgctcgatagaaccaaggag
ccaggtgctaatggcgaccctctctatcaagatatcttaacctcactggtcgacagttat
agtgagcaagataatctggcgcagatgcctatgctagtggcgggacgttatggcttgtct
agcaaagaatttaccccggctatggtcaaatctgtgtttgaaaacttgtctaaggacaag
ccaaagaaacatttcaccttaggtattattgatgatgtttgccactctcacctcgagttt
gatgccagttatgacatagaatcaaaggatgtagtgcgggctatcttctatggtctaggt
gccgatggtaccgtaggtgcaaataaaaacaccataaaaatcataggtgaagatgctgat
tatttcgctcaaggctacttcgtctatgattcgaaaaagtcaggatcacaaaccgagtca
catctgagatttggtaaaaaagccattaatagcccttaccttatccaatcggccaacttc
attgcctgtcatcaggcgaccttcgtcgatactaccgatatgttagctaaggccacagaa
aacgccgtgttcctgcttaatacccaggctagtgtcgacaaggtgtgggatacgctaccc
gccaagatgcagtctcaattgattgagaaaaaaatgagcatgcacgtgatcgatgcctac
aaggtgggggaagagacgggcatgggcaagcgcattaacaccataatgcagacgtgtttc
tttgccctttcgggggtgttagaaaaagatgttgccatcgataagattaaaaagtctatc
gtgaaaacctatgcccataaagggcctaaggtcattgagaaaaacttcgccgcagtggat
cacaccttagctcacctcgaagaggtgaagatacccgcatcagtcaccgccaaggtgatt
aatagacccgtggttgatgataaagcgcctgattttgtcaaacaggttaccgctaagatg
atggcaggtaagggcgatctcatccctgtctctatgctacctgtcgatggtacttaccca
tcgggcaccacccagtgggagaagcgcgatatcgcactgcagatcccggtgtgggaagag
acagcctgtatccaatgtggtaactgctcaatcgtctgcccccatgcggcgatccgcgcc
aagttctatgacaagtctttactcgatacggcgccggatggcttcaagtctcatagcatt
accgctcgcggtttccccgatacccgttacaccttgcaggtctatgcacaagattgtacc
ggttgtaccttgtgtgtcgatgtctgtcctatggtgatacaagaggcaacagacacaagt
cctgaggtcaaagccatcaatatgcagcctaaaggaccgtatatggagcaggctaagaaa
gatctcgatttctttacctcaatcccatacaacgatagatctcgagtggatttctcacat
gttcgtggtgctcagttcttgcagcctctgttcgagttctcgggtgcctgctctggctgt
ggtgaaaccccttatcttaagctaatgtcgcagctctttggtgatcgcttaatgatcgcc
aatgcgacaggttgctcatctatctatggcggtaacttacccactacaccttgggctaag
aatgatgccggccgtggacctgcttgggctaactcattgtttgaagataacgccgagttt
ggctttggtttccgtttagcggccattaagcagcaggagatggctaagcagttattggtg
cgtatcagtcaagacccccaagcgaatctcaagcccgaactggtcgataagctactcaat
tgtgaacagcaaacagagtcagaaattcaggcgcagattaaacgcgtcgacgagctaaaa
attgagctggagaagcatgaaacggaagatgggcttaacttgacctcggttgccgatcag
ctgatccgtcgttcaatctggatcgtaggcggtgatggctgggcttatgatattggctct
agtggcttagatcatgtgttagccagtggtgccgatgtcaatgtgttggtgatggatacc
gaagtgtactctaacaccggcggtcaaatgtctaaatcgacgcctctcggcgcagtggct
aaatttgcagcctcgggtaagcagaccaccaagaaagatgtggcaatgcaagctatctcc
tataacaacgtctacgttgctcgtatcgccttaggtggcgatccacagcagacgctgttg
gcaatgcgagaagcggaagcctataagggaccctcgctcatcatcgcttacagtcactgc
attgcccatggtatcgacatggaaaaaggcttacgccagcagcagttagcggttaagtcg
ggtcactggcctttgtttaggtacaacccgggtctgcgtgaggtaggagagaatccattc
tcactcgattcactgagacctagcatctccttgaaggagtatcgctctcatgaggctaga
ttcactatgttgatacgcagtgatcctgagttagccgaatcactaaccaagcgggcgcag
catgtcgtggagcgtcgatggaaactctatgaggagatagcgtcgcgctctggaggtgag
gtggcggctcatgtagaagttgatcttgaggatatccattaa
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