Shewanella benthica: SHEWBE_3797
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Entry
SHEWBE_3797 CDS
T06707
Name
(GenBank) von Willebrand factor type A domain protein
KO
K07114
Ca-activated chloride channel homolog
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_3797
Transporters [BR:
sbk02000
]
Other transporters
Pores ion channels [TC:
1
]
SHEWBE_3797
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YfbK_C
vWF_A
VWA
VWA_2
VWA_3
VWA_CoxE
HTH_17
Sec23_trunk
Motif
Other DBs
NCBI-ProteinID:
SQH77760
UniProt:
A0A330M9U5
LinkDB
All DBs
Position
SHEWBE:complement(3658392..3660425)
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AA seq
677 aa
AA seq
DB search
MAHSNADSAQGCTSHFAAHQFTAMKSVQGFQLSLISVSLLLALTACGGQQADAEKDSAAA
TEHQQQEEVKEHRTLADQAISDDKSADMSLSVSSGIYGAGKQASERMIKMKSLSRHHVMG
QMSASAVPAFSQAGNRDFVERHTAIGIVGQMSVSAVPAFSQAGNRDNFLRHTANGIMVAG
EIPLSTFSIDTDTGSYTTLRRWINQGRLPEKGTVRVEEMINYFNYQYSTPSTVEQPFSVN
TELAPSPYNEHKMLLRIGLKGYEVDKSQLGASNLVFLLDVSGSMNSQDKLPLLKTSLKML
SQQLSEQDHVSIVVYAGASGVVLDGVKGNDTQAINQALNSLKAGGATNGGAGIQQAYRLA
QKHFIQGGVNRVILATDGDFNVGTTDHQALMDLIAAKRDQGIALTTLGFGQGNYNDHLME
QLADKGNGHYAYIDTLNEARKVLVDELSSTLLTIAKDVKIQVEFNPAIVAEYRLIGYENR
TLNREDFNNDKVDAGEIGAGHRVTVLYEISYVDSPNQANDKLRYGYDNATGMEKYSRDEI
AFLKLRYKPIGEDTSRLISYAIRRDSGVKTLAQASDDYRFSAAVAGLGQLINQSLYTHDL
SYSKVIDLANSAMGQDAFGYRHEFVQLAKTARLLAGQEAVVEGENMSRVIHPIKPMPKPK
VEVQPKYIAPHIISPEY
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcgaacgctgattcggctcaaggctgcacatctcattttgcagctcatcaa
ttcacagcaatgaaaagtgtgcaagggtttcaattatcactcatttcggtttcgctacta
ttggccttgactgcctgcggtggtcagcaggctgatgcagaaaaagacagcgcagcagcg
actgagcatcagcagcaagaagaggtaaaggagcatcgaacactggccgatcaagccatc
tcagatgataaatctgccgatatgtcactctctgtatcgagtgggatctacggagccggt
aagcaggccagtgagcgcatgattaagatgaaatccttaagccgccaccatgtcatgggg
cagatgagtgcttctgctgtgccggcgtttagccaagctggcaacagggattttgttgaa
cgacacacagctattggcatcgtggggcagatgagtgtttctgctgtgccggcgtttagc
caagctggcaacagggataattttttgaggcacactgccaatggcatcatggtggcgggg
gagatcccgctatccaccttctcaatcgataccgataccggcagttatacgacactgaga
cgttggataaatcagggacgcctgccagagaagggtacggttagagtcgaggaaatgatc
aattattttaattatcaatattctaccccctcaactgtcgagcagccattcagtgtcaat
accgagctggcaccgtctccctacaatgagcataagatgttgctcaggattggtctcaag
ggatatgaggtcgataagtcccagctaggggcgagcaacttagtcttcctgctcgatgtc
tccggctcgatgaactcgcaagataaactgccgctgctaaagacatcattgaagatgtta
tcccagcaactgagtgagcaagaccatgtctccatcgttgtctatgcaggcgcatcgggt
gtggtgctagacggggtaaaaggcaacgacactcaggcgattaatcaggcattgaatagc
ctaaaggcggggggggcgaccaatggcggcgccgggatccagcaggcctatcgactggcg
cagaaacatttcatccaaggtggcgttaatcgggtgatcttggctaccgacggtgatttt
aatgtcggcaccacagatcatcaggccttgatggacctgatagcagccaaacgtgaccaa
ggcatagcactaacgaccttaggtttcggtcaaggaaattataacgatcacctgatggaa
caacttgccgataagggcaatggtcattatgcctacatagatacgctcaatgaggcgcgt
aaggtgctggtggatgagctgagttcgaccctgttgaccatagctaaagatgtgaagatt
caagtggagtttaatccggcaatcgtcgccgaatatcgtttgataggctatgaaaaccgg
actctcaaccgtgaagatttcaataatgacaaggtggatgccggcgagataggggcgggt
cacagggtaacagtgctctatgagataagctatgtcgatagtcccaaccaggccaacgac
aaactcagatatggttatgataatgctactggcatggagaaatatagccgggatgagata
gcctttctcaagctgcgctataagcccataggggaagataccagccgattgatctcatat
gcgattcgccgagactctggagttaagaccttagcccaggcgagcgatgactatagattc
tccgccgcagttgccggactggggcaattgattaatcagagtctctatacccatgacttg
agctattctaaggtgatcgacttggctaactctgcaatgggccaagacgcgttcggctat
cgtcatgagtttgtgcagctcgctaagacagctcgcctgctggcagggcaagaggctgtt
gtcgagggagaaaacatgtcgagggtcattcaccccataaaacctatgcccaaacctaag
gtcgaagttcaacctaagtacatagcgccacatataatctctcccgaatactag
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