Shewanella benthica: SHEWBE_4415
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Entry
SHEWBE_4415 CDS
T06707
Symbol
ssb
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
sbk
Shewanella benthica
Pathway
sbk03030
DNA replication
sbk03430
Mismatch repair
sbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHEWBE_4415 (ssb)
03430 Mismatch repair
SHEWBE_4415 (ssb)
03440 Homologous recombination
SHEWBE_4415 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbk03032
]
SHEWBE_4415 (ssb)
03400 DNA repair and recombination proteins [BR:
sbk03400
]
SHEWBE_4415 (ssb)
03029 Mitochondrial biogenesis [BR:
sbk03029
]
SHEWBE_4415 (ssb)
DNA replication proteins [BR:
sbk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SHEWBE_4415 (ssb)
DNA repair and recombination proteins [BR:
sbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
SHEWBE_4415 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
SHEWBE_4415 (ssb)
Mitochondrial biogenesis [BR:
sbk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
SHEWBE_4415 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Motif
Other DBs
NCBI-ProteinID:
SQH78375
UniProt:
A0A330M8Q4
LinkDB
All DBs
Position
SHEWBE:complement(4243459..4244139)
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AA seq
226 aa
AA seq
DB search
MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQERTEWHNIVMY
RRLAEIAGEYLKKGSKVYIEGKLQTSKWQDQATGQDRYKTEINAHEMQMLDSRGQSGGQQ
GDYGSQQAQQQSSGGYQQQAPQQQQGRQQAAQQKPTQQDSGQQQAAPQQQAPAYAPKPQQ
EAQKAPQQAASKADPQQRPAPQSQQAAPQQNFTPDLDDGWDDDIPF
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgtcaataaggtaattttggtcggtaacttaggcaaagaccctgaa
gttcgttacatgcctaacggtaatgccgtagccaactttacagtggcgacgagtgagtct
tggaaagaccaacaaggtcaacaacaagagcgcaccgagtggcacaatattgtcatgtat
cgtcgcttagctgaaattgcaggcgagtacctgaagaaaggttcaaaagtttatatcgaa
ggtaaattgcagaccagtaagtggcaagatcaagcaacgggtcaagaccgttataagact
gagatcaatgctcatgagatgcagatgctcgatagccgtggtcaaagtggcggacagcaa
ggtgactatggttcacagcaggctcagcagcaatcgtctggtggttaccaacagcaggcg
cctcaacagcagcaaggcaggcagcaggcagcacagcaaaaacctactcagcaggatagt
ggtcagcaacaagctgcaccacaacagcaggctccagcttatgcgcccaagcctcagcaa
gaagcgcaaaaagcaccacagcaggcggcttctaaagcggatccacagcagcgtcctgcg
cctcagtcacaacaggctgcgccgcaacagaatttcaccccagatcttgatgacggttgg
gatgatgatatcccgttctag
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