Shewanella baltica OS155: Sbal_3939
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Entry
Sbal_3939 CDS
T00478
Name
(GenBank) putative TIM-barrel protein, nifR3 family
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbl03016
]
Sbal_3939
Transfer RNA biogenesis [BR:
sbl03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Sbal_3939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
DHO_dh
SOR_SNZ
NanE
ThiG
Oxidored_FMN
Motif
Other DBs
NCBI-ProteinID:
ABN63409
UniProt:
A3D9J6
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All DBs
Position
4632975..4633943
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AA seq
322 aa
AA seq
DB search
MQIGPYQLNNQLIVAPMAGVTDQAFRNLCLRYGAALAVSEMLSSNPEVWDTDKSRQRMTH
SGEEGIRSVQIAGADPDLMAQAALFNVEQGAHIIDINMGCPAKKVNKKLAGSALMQNPPL
VKEILQAVVAAVNVPVTLKIRTGWEPEHKNGVQIAQIAQDCGIASLAVHGRTRQCMYRGD
AEYDTIKAIKQNVSIPVVANGDIDSPEKARFVLEYTGADALMIGRGAQGRPWIFREIQHY
LETGNKLAPIEVAEQRQVMLEHLTKLYDLYGEYKGIRFARKHMGWYLDQEAQRQFRADFN
RLETAAEQYSLVECYFDELVQN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcagattggaccctatcaactgaacaatcagctgatcgtggcaccaatggcaggtgtc
accgatcaagctttccgtaatctttgtcttcgttatggcgcagccctagcggtttccgag
atgctttcatccaatcctgaggtttgggatacagataaaagccgccagcgcatgacgcat
tctggcgaggaaggcatccgctcagtgcaaattgcaggagccgatcctgatttaatggcg
caagccgcgttgttcaatgttgaacaaggcgctcacatcattgatatcaatatgggttgc
cccgcgaaaaaagtgaataaaaagctggctggctcagcgctgatgcaaaacccgccgctg
gtaaaagaaattttacaagccgtggtcgccgcagtgaatgtgcccgtcacgttaaagatt
cgcaccggctgggagccagaacacaagaatggtgttcaaatcgcccagattgcccaagat
tgtggcatcgcctcgctcgccgttcacggtcgcacgagacaatgtatgtacagaggcgac
gctgagtacgacacgattaaagcaatcaaacagaatgtctcgattcctgtcgtcgctaat
ggggatatcgacagtccggagaaagcccgctttgtgctggaatacaccggtgccgatgcc
ttgatgataggacggggtgctcaaggacggccttggattttcagagaaatccagcactac
ttggaaacgggtaataagctagcgcccattgaggttgccgaacagcgtcaagtgatgctg
gaacacctcaccaaactttatgatttgtatggtgaatacaagggtatccgcttcgccaga
aaacatatgggatggtacctagaccaagaagctcagcgccaatttagggctgactttaat
cggctggaaaccgctgcagaacagtattccctcgtggaatgttattttgatgaattagta
cagaattaa
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