Shewanella baltica OS185: Shew185_2671
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Entry
Shew185_2671 CDS
T00571
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm03030
DNA replication
sbm03430
Mismatch repair
sbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shew185_2671
03430 Mismatch repair
Shew185_2671
03440 Homologous recombination
Shew185_2671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbm03032
]
Shew185_2671
03400 DNA repair and recombination proteins [BR:
sbm03400
]
Shew185_2671
Enzymes [BR:
sbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shew185_2671
DNA replication proteins [BR:
sbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shew185_2671
DNA repair and recombination proteins [BR:
sbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shew185_2671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABS08806
LinkDB
All DBs
Position
complement(3193320..3194006)
Genome browser
AA seq
228 aa
AA seq
DB search
MNTLLLKTKLNWRALRCQHQLFKGYYQSLLPLLAMPLSEAPLVAMDLEMTGLNPQQDQIL
SIGLVPIERGEIPLARAEQKLVQIRGSVGQSATIHGILDNHLVQAVTIEAAMGWFINQTY
GRVLVAHHAPLDCRFLQQDLLAIYHQALILPAIDTLMLERHRLLREHSVIKEGSLRLGAC
RERYGLPIYTAHSALTDALACGELLLAQMAAMGGAGQLTVADLLRQST
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaatacactgctgctgaaaacgaaacttaattggcgggcgctacgttgccaacatcag
ttatttaagggctattatcaatcgctattacctctgctggcgatgccgttatccgaagca
cctttggtggcgatggatttagagatgacaggtctcaatccgcagcaagatcaaattctc
agtattggcttagtgccgattgagcgcggcgagatccctttggcgcgcgccgagcaaaaa
ttagtgcaaattcgcggcagtgttggccaaagcgcgacgatccacgggatcctcgataat
catctggtgcaggcggtgacgattgaggcagccatgggctggtttatcaatcaaacctat
ggtcgggtgctggtcgcgcatcatgctccgctagattgtcgctttctgcagcaggattta
ttggcgatttatcatcaagccctcatcctacccgccattgatacactcatgcttgaaagg
catcgtttgctacgggaacactcagtgattaaagagggcagtttgcgccttggcgcttgc
cgcgaacgttacggtttgcccatttatactgcccacagtgcgttgaccgatgccttagct
tgcggggaattattattggcgcaaatggcggccatgggcggggcggggcaactaactgtg
gctgatttattgcggcaatcgacttag
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