Shewanella baltica OS185: Shew185_3623
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Entry
Shew185_3623 CDS
T00571
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbm03009
]
Shew185_3623
Enzymes [BR:
sbm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Shew185_3623
Ribosome biogenesis [BR:
sbm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Shew185_3623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABS09748
LinkDB
All DBs
Position
complement(4302091..4302831)
Genome browser
AA seq
246 aa
AA seq
DB search
MVGLIIWQFSLLKLSINVRLDKFICESTPLTRSLAKKALHRGDITCDGIVVKDSGFKVTE
GMRVCLEGEPIALVGVRYLMLNKPVDTICSTIDETYPSVLSLVDVPKPETLHIAGRLDAD
TTGLVLITTDGQWSHKITSPKKECGKRYLVQLADPVDAGLIAVFAAGVELRGEDGLTKPA
LLEIIEPQLVRLTITEGKYHQVKRMFAAVGNHVQGLHRESVGQIELDPALALGEWRYLTA
EEIASV
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtggtcggcctcataatatggcagttttctttattgaagttgagtattaacgtgcgttta
gacaaatttatctgtgagagtaccccactgactcgctcattagcgaaaaaagccctgcat
cgcggtgacatcacttgcgatggcatagtcgtcaaagactcgggctttaaagtgactgaa
ggtatgcgtgtttgtctcgagggcgagcctattgccttagtgggcgtacgttatttaatg
ctcaacaaaccagtcgatacgatttgttcaacgattgatgaaacctatccatcggtattg
agcttagtggatgtgccaaagcctgaaaccttgcacattgccggccgtttagatgccgat
accacagggctagtgctgatcactaccgacggccagtggtcgcataaaattacttcaccg
aagaaagaatgcggtaaacgctatttagtgcaactcgccgatcctgtggatgccggcttg
attgcagtatttgccgctggtgttgaattgcgcggtgaagatggcttaactaagcctgca
ttgctggagattattgagccgcaattagtgcgactcaccatcactgaaggtaagtaccat
caagtgaaacgtatgtttgctgcggtgggcaaccacgtgcaaggattgcaccgtgaaagt
gtcggccaaattgaattagatcccgccttagcgctgggtgaatggcgttatttgaccgcc
gaagaaatagcatcagtttaa
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