Shigella boydii Sb227 (serotype 4): SBO_0370
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Entry
SBO_0370 CDS
T00301
Symbol
dnaX
Name
(GenBank) DNA polymerase III tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo03030
DNA replication
sbo03430
Mismatch repair
sbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBO_0370 (dnaX)
03430 Mismatch repair
SBO_0370 (dnaX)
03440 Homologous recombination
SBO_0370 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbo03032
]
SBO_0370 (dnaX)
03400 DNA repair and recombination proteins [BR:
sbo03400
]
SBO_0370 (dnaX)
Enzymes [BR:
sbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SBO_0370 (dnaX)
DNA replication proteins [BR:
sbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SBO_0370 (dnaX)
DNA repair and recombination proteins [BR:
sbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SBO_0370 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
DNA_pol3_delta
AAA_18
ResIII
AAA_14
AAA_2
AAA_16
AAA_assoc_2
AAA_7
PIF1
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABB65082
ShiBASE_China:
SBO0370
UniProt:
Q325C6
LinkDB
All DBs
Position
385402..387273
Genome browser
AA seq
623 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM
LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA
ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQPQSAPQQAPTVPLPETTSQVLAARQQLQ
RVQGATKAKKSEPAAATRARPVPSALEKAPAKKEAYRWKATTPVMQQKEVVATPKALKKA
LEHEKTPELAAKLAAEAIERDPWAARVSQLSLPKLVEQVALNAWKEESDNAVCLHLRSSQ
RHLNNRGAQQKLAEALSTLKGSTVELTIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIA
DNNIQTLRRFFDAELDEESIRPI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtcttagcccgaaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgaccgcactggcgaacggcttgtcgttagggcgtattcatcatgct
tatcttttttccggtacccgtggcgtcggaaaaacctctatcgcccgactgctggcgaag
gggctaaactgcgaaaccggcattaccgcgacgccgtgcggcgtgtgcgataactgtcgt
gaaatcgagcaggggcgctttgtcgatctgattgaaatcgacgccgcctcgcgcaccaaa
gttgaagatacccgcgacctgctggataacgtccagtacgctccggcgcgtggtcgtttc
aaagtttatctgatcgacgaagtgcatatgctgtcgcgccacagctttaacgcactgtta
aaaacccttgaagagccgccggagcacgttaagtttctgctggcgacgaccgatccacag
aaattgccggtgacgattttgtcgcgctgtttgcaatttcatctcaaggcgctggatgtc
gagcaaattcgccatcaacttgagcacatcctcaacgaagaacatatcgctcacgagccg
cgggcgttgcaattgctggcgcgcgccgctgaaggcagcctgcgagatgccttaagtctg
accgaccaggcgattgccagcggtgacggccaggtttcaacccaggcagtcagtgcgatg
ctgggtacgcttgatgacgatcaggcgctgtcgctggttgaagcgatggtcgaggccaac
ggcgagcgcgtaatggcgctgattaatgaagccgctgcccgtggtatcgagtgggaagcg
ttgctggtggaaatgctcggcctgttgcatcgtattgcgatggtacaactttcgcctgct
gcacttggcaacgacatggccgccattgagctgcggatgcgtgaactggcgcgcaccata
ccgccgacggatattcagctttactatcagacgctgttgattggtcgcaaagaattaccg
tatgcgccggaccgccgcatgggcgttgagatgacgctgctgcgcgcgctggcgttccat
ccacgtatgcctctgcctgagccagaagtgccgcgccagtcctttgcacccgtcgcgcca
acggcagtaatgacgccaacccaggtgccgccgcaaccgcaatcagcgccgcagcaggca
ccgactgtaccgctcccggaaaccaccagccaggtgctggcggcgcgccagcagttgcag
cgcgtgcagggagcaaccaaagcaaaaaagagtgaaccggcagccgctacccgcgcgcgt
ccggtgccatcggcgctggaaaaagcgccagccaaaaaagaagcgtatcgctggaaggcg
accactccggtgatgcagcaaaaagaagtggtcgccacgccgaaggcgctgaaaaaagcg
ctggaacatgaaaaaacgccggaactggcggcgaagctagcggcagaagccattgagcgc
gacccgtgggcggcacgggtgagtcaactttcgctaccaaaactggtcgaacaggtggcc
ttaaatgcctggaaagaggagagcgacaacgcagtatgtctgcatttgcgctcctctcag
cggcatttgaacaaccgcggtgcacagcaaaaactggctgaagcgttgagcacgttaaaa
ggttcaacggttgaactgactatcgttgaagatgataatcccgcggtgcgtacgccgctg
gaatggcgtcaggcgatatacgaagaaaaacttgcgcaggcgcgcgagtccattattgcg
gataataatattcagaccctgcgtcggttcttcgatgcggagctggatgaagaaagtatc
cgccccatttga
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