Shigella boydii Sb227 (serotype 4): SBO_0865
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Entry
SBO_0865 CDS
T00301
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Pathway
sbo00521
Streptomycin biosynthesis
sbo00523
Polyketide sugar unit biosynthesis
sbo00541
O-Antigen nucleotide sugar biosynthesis
sbo01100
Metabolic pathways
sbo01110
Biosynthesis of secondary metabolites
sbo01250
Biosynthesis of nucleotide sugars
Module
sbo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SBO_0865 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SBO_0865 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SBO_0865 (rfbC)
Enzymes [BR:
sbo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SBO_0865 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABB65535
ShiBASE_China:
SBO0865
UniProt:
Q323H3
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All DBs
Position
complement(880174..880743)
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AA seq
189 aa
AA seq
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MNVIKTEISDVLIFEPKVFGDERGFFFESFNQKVFEEAVGRKVEFVQDNHSKSSKGVLRG
LHYQLEPYAQGKLVRCAVGEVFDVAVDIRKSSPTFGKWVGVNLSAENKRQLWIPEGLAHG
FLVLSETAEFLYKTTNYYHPESDRGIIWDDPDIDVKWPLSIHKPILSIKDEKQKMFKEMI
ALEKWNGEY
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattaaaacagaaatttctgatgtgctgatttttgaaccaaaagtttttggc
gatgagcgcggcttcttttttgaaagctttaaccagaaagtatttgaagaagctgtaggc
cgcaaagttgaatttgtccaagataaccattcgaagtctagtaaaggtgttttacgcggg
ctgcattatcagttagaaccgtatgcgcaagggaaattggtacgttgcgctgttggtgag
gtttttgacgtagcggttgatattcgtaaatcgtcaccaacttttggcaaatgggttggg
gtgaatttatctgctgagaataagcgccagttgtggatacctgaaggattagcacatggg
tttttggtgctgagtgagacggcggagtttttatataaaacgaccaattattatcatcca
gagagtgatagagggattatttgggatgatcctgacattgacgtaaagtggcctttaagt
atccataaaccgattttatctataaaagatgaaaaacaaaagatgtttaaagaaatgata
gcgttggagaaatggaatggagaatactaa
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