KEGG   Shigella boydii Sb227 (serotype 4): SBO_4158
Entry
SBO_4158          CDS       T00301                                 
Name
(GenBank) putative type I restriction enzyme R protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sbo  Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:sbo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sbo02048]
    SBO_4158
Enzymes [BR:sbo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SBO_4158
Prokaryotic defense system [BR:sbo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SBO_4158
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD DUF4145 HSDR_N Helicase_C HSDR_N_2 SNF2-rel_dom DUF5614 NAD_binding_9
Other DBs
NCBI-ProteinID: ABB68585
ShiBASE_China: SBO4158
UniProt: Q31TM3
LinkDB
Position
4206978..4210391
AA seq 1137 aa
MEQSLNFEMLRSQWPELAELACMAERYVHSDPESCLVKLRNYTELMVRWLYRQERLPEGI
KANLYDLMNADVFTSMMPEAIIMKMDALRIHGNRAAHGGRIKAKDTYWLLKEAYLLGIWL
YVRYAHGNVDDCPKFTLPPLTQSSGRADEKRLEDAIKAQDESRERELALQRALQQEQEKA
EHLTQRLNEARARNQHVADILSIDEAETRRRLIDSRLLAADWNVGEELKNTDQVTQEHPV
KEQPTTSGDGYADYVLWDEAHKPLAVVEAKKTSVNAEQGRIQARLYADWLEKEYGQRPVI
FYTNGYDIWLWDDHKTHGYPPRRVFGFYSKESLQYLIQQRETRLPLNRVPHVKDNEGKAV
AGRLYQLETIARVSERFTNKYRQSLIVQATGTGKTRVAIALSKLMIDARWVKRVLFLCDR
KELRKQAANAFNQFTNEPLYVVGKSKKADRQNARIYIATYPGMMKIMDHFDVGYFDLIIA
DESHRSIYNVYGDLFKYFDALQIGLTATPIDMVSKTTFGLFGCEGRIPTANYSLEDAIAD
NNLVPYEVVTHTTEFLREGIKREKLSDAQIRELEEQGIDPNTLEFDGKALDEAIYNKDTN
RYILRNLMENGLKDRDGQLPGKTIIFARNHKHALLLNELFDDMYPQFAGRFCQVIDNYDP
RAEQLIDDFKGLDESTNKELTIAISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRG
TRLCPGLYGYDDNGKPLDKQKFRIFDHWGNFEYHELHTEEAEVTATKSLAQKRFEAWVML
GAAAQRKFDKQAVDLVAHQLREQINALDEKSIAVQEKWQQKAQYSDEKVLRQLSPKTQQD
LLSVLAPLMQWLDVRGQSDAIRFDMDILAAQTARYTNPEELDVLWPIIVEKVERLPPHLA
QVQQQGQRINQLRNLSWWKQASLEELEDIRIHLRGIMHLMEKDATPKFGSIQVDITEDAN
LIQTETRKTNIRSIDFKLYRQQVQGALEPLFQQNPVLKKIRNGEPVTQNELDELAKLVLI
QNPNVDIRALKEFYPQATASLDKLLRTIIGMDSDAVEVRFAQFAADNSLTSQQLRFLSLL
KNHIRDYGTIEMRQLFEQPFTHIHNEGVTGVFPDIAQIARLQKIVEELGVVTDAATV
NT seq 3414 nt   +upstreamnt  +downstreamnt
atggagcagtctctcaattttgaaatgttgcgcagccagtggccggaactggcagaactc
gcatgtatggcagagcgctatgttcactccgatccggaaagctgcctggttaagctgcgc
aactacaccgaattgatggtgcgctggttgtatcgtcaggagcggttgccggaaggtatt
aaggctaatctttacgatttaatgaacgctgatgtctttaccagcatgatgccggaagcc
atcatcatgaaaatggatgcgctgcgtatccatggcaaccgtgccgcgcacggcggacgt
atcaaagctaaagatacttactggctgctcaaagaagcgtatttgttgggaatttggctg
tatgttcgctacgcccacggtaatgttgatgactgccccaaatttacactccctccatta
acacaatcttcaggtcgtgcagatgaaaaacgtctggaagatgcaatcaaggctcaggat
gaaagccgtgagcgcgaactggcgctacaacgcgcactacagcaagaacaggaaaaggcc
gaacacctcactcaacgcctgaatgaagccagagcgcgtaaccagcatgttgccgatatt
ctctctattgatgaagcggaaacccgccgtcgcctgattgactctcgcttacttgcagcc
gactggaatgtaggggaagaacttaaaaacacggatcaagtcacacaagaacatccagtc
aaagagcaacccaccacctctggtgacggttatgcagactatgtcttgtgggatgaggca
cacaaaccgttggcggtggtggaagcaaaaaaaaccagcgtcaatgccgagcaaggacga
attcaggcccggctgtatgcagactggctggaaaaagaatacggtcagcgtccggtcatc
ttctacaccaacggctatgatatctggctgtgggatgaccataaaactcatggttatccc
ccgcgtcgggtgtttggcttctacagcaaggaaagcctgcaatatcttattcagcagcgt
gaaacccgtctgccgctgaacagagtgccacacgtaaaagataacgaaggtaaggccgtt
gccggacgtttgtaccagctcgaaaccattgcccgcgtcagtgaacggtttaccaacaag
taccgacaatcgttaattgttcaggctacgggtacaggcaaaacccgcgtggcaattgca
ctaagcaaactgatgattgatgcccgctgggtaaaacgcgtcctgtttctttgcgaccgt
aaagaactgcgtaaacaggcggcaaatgcctttaatcaattcaccaatgagccgctgtat
gtggtcgggaaatcgaaaaaagcagacaggcagaatgccagaatctacatcgctacctat
cccggtatgatgaaaatcatggaccatttcgatgtcggttatttcgatttgatcatcgcc
gatgaatcccaccgctctatctacaacgtctacggcgatctgtttaagtattttgatgcc
ctccagattggcctgacggccacgccaattgacatggtgagtaaaaccactttcggcctg
tttggttgtgaaggacgtattcctaccgccaactacagcctggaagatgccatcgccgat
aacaatctggttccctatgaggttgtcacacacacaacagaattcctgcgcgaaggtatc
aaacgggagaaattaagcgacgcacaaatccgcgagctggaagaacaaggcatagatccc
aatacgctggagtttgatggcaaggcgctggatgaggcgatctacaacaaagacaccaac
cgctatatcctgcgtaacctgatggaaaatggcctgaaagatcgggacggccagttgcct
ggtaaaaccatcattttcgcccgtaaccacaaacacgcgctgctgttgaatgaattgttc
gacgatatgtacccacagtttgccgggcgcttctgccaggtcatcgacaactacgatccc
cgcgccgagcaactgattgatgattttaaagggctggatgaaagcaccaacaaagagctg
accatcgctatctccgttgacatgctcgataccggtattgatgtcccggaaattgtgaat
ctggtctttgccaaaccggtcaaatcaaaagtgaagttctggcagatgattggccgtggt
acgcgcctctgtccggggttgtacggttacgacgataacggcaaaccgctggataaacag
aaattccgcattttcgatcactggggcaattttgagtatcacgagctgcataccgaagag
gcggaagtcacagcgacaaaatcgcttgcgcaaaaacgcttcgaagcgtgggttatgctg
ggggccgctgcgcagcgtaaattcgacaaacaggcggtggatttagttgctcaccagctt
cgcgagcaaatcaacgcactggatgaaaagtcgattgccgtacaggaaaaatggcagcag
aaagcgcagtacagtgatgaaaaggtgctgcgccagctttctccgaaaacacagcaggat
ctgctatctgttctggccccgttgatgcagtggctggacgtgcgcgggcaaagcgatgcc
atacgctttgatatggatattctggcggcgcaaactgcccgttataccaacccggaagag
ctggatgttctctggccgatcatcgtcgaaaaagtggagcgcctgccgccgcatttggcg
caggtgcagcaacagggacaacgaatcaatcagcttcgtaatttaagctggtggaagcag
gccagcctggaagagctggaggatattcgcattcatttgcgcggtatcatgcacctgatg
gaaaaagacgcgacgcctaaatttggttcgatacaggtggatattaccgaagatgcgaac
ctgatccagacggagacccgcaaaactaatatccgctcgattgatttcaaactctatcgc
cagcaggttcagggggcgctggagccgctgttccagcaaaacccggttctgaagaaaatc
cgcaacggcgagccagtcacgcaaaacgagctggatgagctggcgaagctggtgctgatc
cagaaccccaacgttgatattcgtgcgttgaaagagttttatccgcaggcaaccgccagc
ctggataaacttttgcgtaccatcatcgggatggacagcgacgcggtggaagtgcgtttt
gcccagttcgccgctgataacagcctgaccagccaacaactgcgcttcctgtcattgctg
aaaaaccacattcgcgattacggcaccattgaaatgcggcagctctttgaacagcctttt
acgcatatccacaacgaaggcgttaccggtgtgttccctgatatagcgcaaatcgcccgc
ctgcaaaagatagtcgaagagctgggtgttgtgaccgacgcagcgacggtataa

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