Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101033038
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Entry
101033038 CDS
T04350
Symbol
SKIV2L2
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101033038 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101033038 (SKIV2L2)
03041 Spliceosome [BR:
sbq03041
]
101033038 (SKIV2L2)
03009 Ribosome biogenesis [BR:
sbq03009
]
101033038 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:
sbq03016
]
101033038 (SKIV2L2)
Enzymes [BR:
sbq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101033038 (SKIV2L2)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
101033038 (SKIV2L2)
Spliceosome [BR:
sbq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101033038 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
101033038 (SKIV2L2)
Ribosome biogenesis [BR:
sbq03009
]
Eukaryotic type
Pre-60S particles
Helicases
101033038 (SKIV2L2)
Transfer RNA biogenesis [BR:
sbq03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
101033038 (SKIV2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
101033038
NCBI-ProteinID:
XP_003925897
UniProt:
A0A2K6TKX1
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MADAFGDELFSVFEGDSTTTEGTKKDKEKEKGKWKGPPGSADRAGKRFDGKLPSESTNNG
NNKRDADFEGTDEPIFGKKPRIEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPADE
DYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALR
EKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGS
EVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLH
KQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGD
QKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMV
EEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALF
ATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVD
EKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPG
VVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLV
KVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKP
DEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPI
DDMGIHDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELK
KARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDL
SAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLS
SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE
NKFAEGITKIKRDIVFAASLYL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcattcggagatgagctgttcagcgtgttcgaaggcgattcgaccactacg
gagggaaccaaaaaagacaaggaaaaggagaaagggaaatggaaggggcctccagggtct
gcagacagggcagggaaacgttttgatggtaaattaccatcagaatcaactaataatgga
aataataagagagatgcagatttcgaaggtacagatgaacccatttttggaaagaagccc
aggatagaagagtcaataactgaagacttaagtttggcagacctgatgcctagagtcaag
gtacaatcagttgaaactgttgaagggtgtacacatgaggttgcacttcctgcagatgaa
gattatttaccacttaaacctcgagttggaaaagctgctaaggaatacccattcattctt
gatgcttttcaaagagaagccattcagtgtgttgacaataatcagtctgttctagtatct
gcacatacatcagcaggaaaaacagtatgcgctgagtatgccattgcattggctttaagg
gaaaaacagcgtgtaatatttaccagcccaattaaggctctgagtaaccagaaataccgt
gaaatgtatgaagaatttcaagatgttggtctgatgactggtgatgttactattaatcct
acagcatcttgtcttgttatgaccacagagattttgagaagtatgctgtacagaggttct
gaagttatgcgagaagttgcttgggttatatttgatgaaattcattatatgagagattca
gaacgtggtgtagtatgggaagaaactattattttgcttcctgataacgtccactatgtc
tttctttcggctactattccaaatgcccgacagtttgctgaatggatttgccatttacat
aaacagccttgtcatgtaatttacacagattatcggcccactccattgcaacactacatt
tttccagcagggggagatggtctgcatcttgtggttgatgaaaatggtgacttcagagaa
gataattttaatactgcaatgcaagtgcttcgagatgcaggtgatttggccaaaggagac
cagaaagggcggaaaggaggaacaaaaggaccatcaaatgtgttcaaaattgtgaagatg
attatggaaagaaatttccaacctgtgattattttcagttttagcaagaaagattgtgaa
gcctacgcacttcaaatgaccaaattagatttcaacacagatgaagaaaagaagatggtg
gaagaagtattcagtaatgcaattgattgcttatccgatgaagataaaaaactccctcag
gtagaacatgtacttcctcttttgaagagggggattggtattcaccatggtggtttactt
cctattttgaaagaaactatagaaattctcttttctgaaggattgataaaggccttattt
gccacggagacctttgctatgggaattaacatgccagctagaactgttttatttacaaat
gcccgcaaatttgatgggaaggatttccgatggatttcttctggtgaatacattcagatg
tctggtcgtgctggaaggagaggaatggatgatagaggaattgtaattcttatggtagat
gaaaagatgagcccaacaattggaaaacaattacttaagggctccgctgatcctctaaat
agtgctttccatttgacctacaacatggttttgaacttactgcgtgtagaagaaattaat
ccggagtacatgttggaaaaatccttctaccagtttcagcattacagagcaattccagga
gtagtagagaaggtaaagaactcagaagaacagtataataaaatagtaattcccaatgaa
gaaagtgtagttatctattataagattagacaacagcttgccaaattgggtaaagaaatt
gaagaatatattcacaaaccaaaatactgcttaccttttctacaaccaggtcgtttggta
aaggtaaagaatgaaggagatgactttggctggggagtagtggtgaatttctcaaaaaag
tcaaatgttaagcctaactctggtgaactggatcctttgtatgtagtggaagtacttctg
cgctgtagcaaagagagcttgaaaaattcagctaccgaagctgcaaaaccagctaaacct
gatgagaaaggagagatgcaggttgtcccagttttggtgcatctcctgtctgctatcagc
agtgttagactttacattcctaaagatcttcggccagtggacaatagacagagtgtttta
aaatcaatacaggaagttcagaaacgttttcctgatggcgtccccttattagatcctatt
gatgatatgggcattcatgatcaagggctgaaaaaagtcattcagaaagtagaagctttt
gagcatcgaatgtattctcatccacttcacaatgatccaaatttggaaactgtgtataca
ctttgtgaaaaaaaagcacagattgcaatagatattaaatctgcaaagcgagaactgaag
aaagcaagaactgtcctacaaatggatgaactcaaatgtcgcaaacgtgttttaagaagg
ttgggatttgctacttcttctgatgtaatagagatgaaaggacgagtggcttgtgagata
agcagtgctgatgagctccttctaactgagatgatgtttaatggccttttcaatgacctt
tctgcagaacaggcaacagcattattaagctgctttgtgtttcaagagaattctagtgag
atgcccaaattaacagaacaattagcaggaccacttcgtcaaatgcaggaatgtgctaaa
agaattgcaaaagtttctgcagaagccaaattggaaattgacgaggaaacttatctaagc
tcatttaaacctcacttaatggatgtagtatatacctgggcaactggagctacatttgcc
catatctgcaaaatgacagatgtctttgaaggcagcataattcgttgtatgaggcgcctg
gaagaattgcttcgacaaatgtgtcaagcagcaaaagccattggaaacactgagctggaa
aataaatttgcagaaggaatcaccaaaatcaagagagatattgtgtttgctgccagcctc
tacttgtag
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