Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101042480
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Entry
101042480 CDS
T04350
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101042480 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbq03400
]
101042480 (LIG4)
Enzymes [BR:
sbq01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
101042480 (LIG4)
DNA repair and recombination proteins [BR:
sbq03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
101042480 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
101042480
NCBI-ProteinID:
XP_010337132
UniProt:
A0A2K6SBK8
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKTKGRAEKIRYFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLVKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIEHIEKDMRHQTFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPAEGSLTPFIHNAFQTDTQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRSEILSSIFTPIPGRIEIVQKTQAHTKDEVIDALNE
AIDKREEGIMIKYPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGKKPSVFHTLSRVGSGYTMKELYDLGLKLAKYWRPFHKKTPPSSILC
GSEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKACGKLASKHLYIGGDDGPPEKKRKAPPKIKKVIGIIEHLKAPNLTNVNKISNIFE
DVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIILSDKHDV
VKPAWLLECFKTKSFVPWQPCFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSNEQTPEEMASVIADLEHRYSWDRSPLSIFRRHTIYLDLYAVINDLSTKTEGTRLAV
KALELRFHGGTVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKDSWITDSIDK
YELQEESQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcgcaaactgttgcatctcacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaactaaaggacgtgcagaaaaaatcagatactttagg
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgaggctaattcttcctcagctagaaagagagagaatg
gcctatggcattaaagaaactatgcttgctaagctttatattgaattgcttaatttacct
agagatggaaaagatgccctcaaacttttaaactacagaacacccactggaactcacgga
gatgctggagactttgcaatgattgcatattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaatgaccttttagactcagttgccagcaataattct
gctaaaagaaaagacctagtaaaaaagagtcttcttcaacttataactcagagttcggca
cttgagcaaaagtggcttattcggatgatcataaaggatttaaagcttggtgttagtcag
caaactatcttttctgtttttcataatgatgctgctgagttgcataatgtcactacagat
ctggaaaaagtctgtaggcaactgcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcctttaaaccaatgctagctgctattgcagatattgagcacatcgag
aaggatatgagacatcagactttctacatagaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggggatgtgtataaatacttctcccgaaatggatataactatactgat
cagtttggtgcttctcctgctgaaggttctcttaccccattcattcataatgcattccaa
acagatacacaaatctgtattcttgatggtgagatgatggcctataatcctaatacacag
actttcatgcaaaagggaattaagtttgatattaaaagaatggtagaagattctgatctg
cagacttgttattgtgtttttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtctgagattcttagtagtatttttacaccaattccaggtagaata
gaaatagtgcagaaaacacaagctcatactaaggatgaagtcattgatgcattgaatgaa
gcaatagataaaagagaagaaggaatcatgataaaatatcctctgtccatctacaagcca
gacaaaagaggtgaagggtggttaaaaattaaaccagaatatgttagtggactaatggat
gaattggacattataattgttggaggatattggggtaaaggatcacggggtggaatgatg
tctcattttttgtgtgcagtagcagagaagccccctcctggtaaaaagccatctgtgttt
catactctctctcgtgttggctctggttataccatgaaagaactgtatgatctgggtttg
aaattggccaagtactggaggccttttcataaaaaaactccaccaagtagcattttatgt
ggatcagagaagccagaagtgtacattgaaccttgtaattctgtcattgttcagattaag
gcagcagagatagtacccagtgacatgtataaaactggttgtaccttgcgttttccacga
attgagaagataagagatgacaaagagtggcatgagtgcatgacactggatgacctagaa
cagcttaggggaaaagcatgtggaaagcttgcatctaaacacctttatataggtggtgat
gatggaccaccagaaaaaaagcggaaagctcccccaaagataaagaaagtcattggaatt
attgagcacttaaaagcacctaaccttactaatgtaaacaaaatttctaatatatttgaa
gatgtggagttttgtgttatgagtggaacagatagccagccaaaacctgacctggagaac
agaattgcagaatttggtggttatatagtacaaaacccaggcccagacacatattgtgta
attgcagggtctgagaacatcagagtgaaaaacataattttgtcagataaacatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtgccatggcagcct
tgctttatgattcatatgtgcccatcaaccaaagaacatttcgcccgtgaatatgattgc
tatggtgatagttattttgttgatacagacttgaaccaactgaaggaagtattctcagga
attaagaattctaacgagcagactcctgaagaaatggcttctgtgattgctgatttagaa
catcggtattcctgggatcgctctcctctcagtatatttcgacgccacaccatttatttg
gacttgtatgctgttattaatgacctgagtaccaaaactgaggggacaagattagctgtt
aaagctttggagcttcgatttcatggaggaacagtagtttcttgtttagctgagggagtg
tctcatgtaatcattggtgaagatcatagtcgtgttgcagattttaaagcttttagaaga
acttttaagagaaagtttaaaatcctaaaagacagttggataactgattcaatagacaag
tatgaactacaagaagaaagccaatatttgatttaa
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