Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101050171
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Entry
101050171 CDS
T04350
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101050171 (NRDE2)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101050171 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
Motif
Other DBs
NCBI-GeneID:
101050171
NCBI-ProteinID:
XP_003939913
UniProt:
A0A2K6T6F0
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MALFPAFAGVSETPDSGSSRKELDWLSNPSFCVGSITSRSQQTEAATAHVSEGSPLSRSP
LKSEPSDESDTNKKFKQTSRKKKKEKKKRRKHQHHKKTKRKHGQSSSSRSETDTDSEKDK
PSRTIGGSKKESEKPNQGNNAAADTGHRFVWLEDIQAVTGETFRTDKKPDPANWEYKSLY
RGDIARYKRKGDSCLGINPAKQRISWEGTSTEKKHSHKQVERYFTKKSVGLMNIDGVAIS
SKTEPPSSDPASFIPVKDLEDAAPVTTWLNPLGIYDQSTTQWLQGQGPPEQESKQPDTQP
DSESAALKARVEEFNRRVRENPRDTQLWMAFVAFQDEVMKSPGLYAIEEGEQEKRKRSLK
LILEKKLAILERAIESNQSSVDLKLAKLKLCTEFWEPSTLVKEWQKLIFLHPNNTVLWQK
YLLFCQSQFSTFSISKIHSLYGKCLSTLSAVKDGSILSHPALPGTEEAMFALFLQHCHFL
RQAGHSEKAISLFQAMVDFTFFKPDSLKDMPTKGQVEFFEPFWDSGEPRAGEKGARGWKA
WMHQQERGGWVVINPDEDDDEPEEDDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKT
KKQTEEDCEDPERQVLFDDIGQSLIRLSSQDLQFQLVEAFLQFLGVPSGFTLPASCLYLA
MDENSIFDNGLYDEKPLTFFNPLFSGASSVGRMDRLGCPRWTRGQNREGEEFIRNVFHLV
MPLFSGKEKSQLCFSWLQYEIGKVMWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNSF
CLWKQYAHLEWLLGNTEDARKVFDTALGTAGSQGLKDSELCELSLLYAELEVELLPEVRG
AASARAVHILTKLTESSPYGPYTGEVLAVHILKARKAYEHALQDCLGDSCVSDPAPTDSC
TRLISLAKCFMLFQYLTIGIGAAVRIYEQVFAKLHGSVFPEGSGEGNSASSQSWSSVLEA
ITLMHASLLRFHMKVSVYPLAPLREALSQALKLYPGNQVLWRSYVQIQNKSHSASKTRRF
FDTITRSAKLLEPWLFAIEAEKMRKRLVETVQRLDGREIHATIPETGLTHRIQALFENAM
RSDGGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKVLYLDAVEYFPEEMQEV
LDLMTEKELRVRLPLEELELLLED
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgcgggggttagtgagacccccgatagtgggagctccagg
aaagagttagactggctgagcaacccaagcttttgtgtcggatccataacgtcccggagc
caacaaactgaagcagccacagcccatgtttctgaagggtcaccactgtcaaggagtcct
ctgaaatcagagccttcagatgaaagtgacactaacaaaaagttcaaacaaacaagcaga
aaaaagaagaaagagaaaaagaaaagaaggaagcaccagcatcataagaaaacaaagagg
aaacatggacagtcgagtagcagcaggtctgagacagacactgattctgaaaaggacaaa
ccttccagaaccatcggaggcagtaaaaaggaatctgagaaaccgaatcaaggaaataat
gctgcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgacagga
gaaaccttcagaacagataagaaaccagatcctgcaaactgggagtacaagtctctctac
cgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaatcctgcg
aagcaacgcatatcttgggaagggacttccacagagaagaagcattcacacaagcaggtt
gaacgctattttactaagaagagtgtggggttaatgaacatcgatggagttgccattagc
agtaaaactgaacctccatcatctgaccccgcctcctttataccagtgaaggacttggaa
gatgcagctcctgttacaacctggttgaatcctctggggatttatgatcagtcaactaca
cagtggttacaaggacagggtcctccagagcaggaatccaagcagccagacacacagcca
gacagcgagagtgcggctctcaaggccagggtggaggagttcaacaggagggtgcgggag
aatccgcgggatacgcagctgtggatggcatttgttgcttttcaggacgaggtcatgaaa
agtcctggcctgtatgccatcgaggaaggagagcaggaaaagcgaaagaggtccctgaag
ctcattctggagaagaagctggccattctggagcgggccattgagagcaaccagagcagt
gtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctg
gtcaaagagtggcagaaactgatatttttacatcccaataatacggtcctttggcagaaa
taccttttgttttgccagagccagtttagtaccttttcaatatcaaaaattcacagtctt
tatggaaaatgcttgagcaccttgtctgctgtgaaggatggcagcatcttatctcaccct
gcgttgcctggcacagaagaggccatgtttgccctctttcttcagcactgccactttctg
cggcaggccggccactctgagaaggccatctcattgttccaggccatggtggacttcaca
ttcttcaaacccgacagcctgaaagatatgcctaccaaaggacaggtagaattctttgag
cccttttgggacagtggagagccccgggctggggagaagggagcccgaggctggaaggcg
tggatgcaccagcaggagcgaggtggctgggtggtcatcaacccagacgaggatgacgat
gaaccagaagaggacgatcaggaaataaaagataagactcttcccaggtggcagatctgg
cttgctgctgagcgttcccgagaccagaggcactggcggccctggcgccctgataagacc
aagaagcaaaccgaggaagactgtgaggatcctgagagacaggtgttgtttgatgatatt
gggcagtctttgatcagactttcaagccaagatctgcagttccagctggtggaggccttt
ctgcagttcttgggtgtgccttctggcttcactcttccagcctcctgtctctatctggcc
atggatgagaacagcatctttgacaatggactttatgatgaaaagcccttgacttttttc
aaccctttgttttccggggccagcagtgtgggccgcatggaccggctgggctgtcctcgc
tggaccaggggtcagaaccgagagggtgaggagttcatccgcaacgtcttccacctggtc
atgcctttgttttcaggcaaagagaagtctcagctctgcttctcctggttacagtatgag
attggaaaggtcatgtggtgtctgcacactaaaaacaagaagagattaaagtcacaaggg
aagaactgcaaaaaactcgccaagaatctccttaaggagccagaaaaccgcaacagcttt
tgcctctggaagcagtatgcccatctggagtggttgcttggcaacacagaggatgctagg
aaagtttttgacacagcactcggcacggcaggaagccaaggactgaaggactctgaactc
tgtgagctcagtctgctctatgccgagctggaggtggagctgttgccggaagtgagaggg
gccgcctccgctcgagctgttcacatattaaccaagctgaccgagagcagcccctacggg
ccctatactggagaggtgttggctgttcacattttgaaagcacgaaaggcttacgagcac
gcgctgcaggactgtttgggtgacagctgtgtctccgatccagctcccaccgattcctgt
acccgcctaattagcttggccaaatgcttcatgctcttccagtatttgaccatcgggatt
ggtgctgctgtacggatatacgaacaggtatttgccaaactgcacggttctgttttccca
gaaggctctggcgaggggaacagtgccagctcccagagttggagcagtgttctcgaagcc
atcacactgatgcatgcaagcctgctgagattccacatgaaagtgagtgtttacccgctg
gcccctctgcgagaggcactctcacaggctttaaagctgtatccaggcaaccaggttctt
tggaggtcctatgtccagattcagaataagtcccacagcgccagcaagaccaggagattt
tttgacacaatcaccaggtctgctaaactcttggaaccttggctgtttgcaattgaagct
gagaaaatgaggaaaagactagtggaaactgttcagaggttagacggtcgagagatccac
gccacgattcctgagaccggcttaacacatcggatccaagccctgtttgaaaacgccatg
cgcagcgacggtggcagccagtgccccttgctgtggaggatgtatttgaactttttggtt
tccttaggaaataaagaaagaagcaaaggtgtattctacaaagcacttcagaattgtcct
tgggcaaaggtgttgtacctggacgctgtggagtacttccccgaggagatgcaggaggtc
ctggatctgatgaccgagaaggagctccgggtgcgcctgccactggaggagctggagctg
ctgctggaggattag
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