Sphaerochaeta globosa: SpiBuddy_2981
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Entry
SpiBuddy_2981 CDS
T01439
Name
(GenBank) putative sigma54 specific transcriptional regulator
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
sbu
Sphaerochaeta globosa
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbu03000
]
SpiBuddy_2981
Transcription factors [BR:
sbu03000
]
Prokaryotic type
Helix-turn-helix
Other families
SpiBuddy_2981
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_2
HTH_7
PAS_8
PAS_9
HTH_31
MCM
HTH_8
AAA_3
HTH_11
AAA_16
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ADY14788
UniProt:
F0RZN7
LinkDB
All DBs
Position
complement(3226263..3228056)
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AA seq
597 aa
AA seq
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MAVSTTHIFGTDPQVIEPLHADIIVARGITAIAIALQKPSVHVVPINWSNADLLSALSQA
KAASPDGHIGLITNEQLCEQEELATLVGLDVSVFQVTDQNDVLEGVSTLQKQGCTMFVGG
LTMCRICEERNLPFIHVKTGYQAVVHAVNEAVGAARSLDRAQTRGNLLGTLLNNANYALL
AIDSSGQIIAGNRQAENLFGKSPLEGLPVEDVYFSSRWAEAFNSGNQKEELVTINGQQCL
VTQQPISMDEEKAGFLYTFQNAEAIRQTEHKIRTELNRKGLVARYSFSDIVTQNPHMQAL
VQKARRFSQVPGTVLLLGETGTGKELFAQSIHNASARAKEPFVAVNCAALPEQLLESELF
GYTDGAFTGAAKGGKAGLFELAHKGTLFLDEIAEMPIVVQAKLLRVLQEREVRKIGADMV
IPVDVRIISAANNTIIDKVREGKFRLDLFYRISLLSLQLIPLRERLEDIGILFRHFVQQY
CRRHNLKEPLLTEQAIAALNAFPWPGNIRELRNAAERLAILNTSDVVTVQEIDLLDIGST
SLRMHDEPLKQIRRKSKVSDEELYQQFLTSGLSREAFAKQMGLSRTTLWRKFAAFEQ
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttggccgtcagtactacccatatctttggaaccgacccccaagttattgaaccacttcat
gccgatattattgtagctcgaggaattactgctatcgctattgccttgcagaaaccttca
gtgcacgtggtgcccatcaattggagtaatgccgatctgctctccgccctctcccaggca
aaggcagcctcgcctgacggccatatcggtcttattaccaatgaacagttgtgcgagcag
gaggaattggccaccttggtcggcctcgatgtctctgtattccaggttaccgaccagaat
gatgtccttgagggtgtatccaccttacaaaagcaaggttgcaccatgttcgtcggcggc
cttaccatgtgtaggatctgtgaagagcgtaatctccccttcatccatgtgaagaccggg
tatcaggcggtggtgcacgccgtcaatgaggcggttggcgctgcccgttcccttgatcgt
gcccagaccagaggaaacctgcttgggacgctgctcaacaatgcaaattatgcgctgctt
gcaatcgacagcagcggccaaattattgcaggcaatcgtcaagctgaaaacttgttcggc
aaaagtccgttggaaggcttgccggtagaggatgtttatttttcgagcagatgggctgaa
gccttcaattccggaaatcagaaagaagaactggtcaccatcaacggtcagcagtgcttg
gttacccagcaacctatcagcatggatgaggaaaaggctggtttcctctatacgttccag
aatgccgaggctatacggcagacagaacataaaatccgcactgagttgaatcgcaaggga
ttggttgcccgctacagtttctccgatattgttacccagaatccccacatgcaggctttg
gtgcagaaggcaaggcgcttcagccaggttcccggcaccgttttgttgctcggggagaca
ggtaccggcaaggagttgttcgcccagagcatccacaatgcttcagcacgtgccaaggag
ccttttgtagctgtcaactgcgccgccctgcctgaacaattgctggaaagcgagctgttt
ggctataccgatggagcgttcaccggggctgcaaaagggggcaaggccggtctgttcgag
cttgcccacaagggaacgctgtttctcgatgagattgccgagatgccgattgtggtacag
gctaaactcttgagagtcttgcaggaacgtgaggtccgcaagatcggtgctgatatggta
atccctgtggatgtgcgcattatcagcgcagcaaacaataccattatcgataaggtgagg
gagggtaagttccgcctcgacctattttaccgaatcagcctgttaagcctgcagttgatt
cctctgcgcgagaggctggaggatatcggcattttgttcaggcattttgtccagcagtac
tgcaggcggcacaatctgaaggaaccgttgttgaccgagcaggctattgccgcgctcaat
gcttttccttggccgggaaacatccgggagttacggaatgccgcagaaaggctcgccatt
cttaatacttccgatgtagtcacggtccaggagattgatttgttggacatcggctccacc
agcctgcggatgcatgatgaacctctcaagcaaatccggcgcaagagcaaggtatcggat
gaagagctctatcagcaatttcttaccagcggtttgagccgggaagcatttgccaagcaa
atgggtctgagcaggacaacgctctggcgtaaatttgctgcattcgaacagtaa
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