Shewanella carassii: TUM17387_26560
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Entry
TUM17387_26560 CDS
T07543
Name
(GenBank) hypothetical protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
scaa
Shewanella carassii
Pathway
scaa00521
Streptomycin biosynthesis
scaa00523
Polyketide sugar unit biosynthesis
scaa00541
O-Antigen nucleotide sugar biosynthesis
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa01250
Biosynthesis of nucleotide sugars
Module
scaa_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
TUM17387_26560
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
TUM17387_26560
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
TUM17387_26560
Enzymes [BR:
scaa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
TUM17387_26560
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BCV67297
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All DBs
Position
complement(3003350..3003688)
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AA seq
112 aa
AA seq
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MIRVISGEIYDVAIDIRPQSPTFGKWHGLYLSAQNRCQLWIPPGFAHGFYVTKGPAEVIY
KCSDYYQPGDEGAIVWNDADLAIDWPLNTALGEPLLSAKDRQAKPFCAQKWV
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
ttgattcgggttatcagcggtgagatttacgatgtcgccatcgatattcgtccccaatct
cccacctttggaaagtggcacggtttgtatttatcggcacagaaccgctgtcagctgtgg
atcccaccggggtttgcccatggtttttatgtgaccaagggcccggccgaggtgatatac
aagtgcagcgattattatcagcccggagatgaaggcgccattgtctggaacgatgccgac
ttagcgatagactggccgctgaatactgcactgggtgagccattactctctgccaaagac
agacaggccaagcccttttgcgctcaaaagtgggtttaa
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