Sphingomonas cannabina: LZK98_03125
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Entry
LZK98_03125 CDS
T08607
Symbol
prsR
Name
(GenBank) PEP-CTERM-box response regulator transcription factor
KO
K02481
two-component system, NtrC family, response regulator
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scab02022
]
LZK98_03125 (prsR)
Two-component system [BR:
scab02022
]
NtrC family
Unclassified
LZK98_03125 (prsR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Mg_chelatase
AAA_16
HTH_28
HTH_23
HTH_17
AAA_2
Xre-like-HTH
HTH_29
HTH_30
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UIJ45961
LinkDB
All DBs
Position
626481..627833
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AA seq
450 aa
AA seq
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MSETRKLLIVEDDLALQRQLRWAYEGYEVHVAADRESAIAVLRAEEPAVATLDLGLPPDP
DGTSEGFATLQAILELKPDTKVIVASGHGARESARIAIAAGAWDFYAKPIDIDALGLIVA
RAFHVHALEAENRRLAEAGSSTALGGMITAAPEMLKVTRTIDRVAGADVSVMLLGASGTG
KELLARGLHEASPRRRGAFVAINCAAIPETLLESELFGHEKGAFTGAVKTTEGKIEAAHG
GTLFLDEIGDVPLPLQVKLLRFLQERVIERIGGRKPIPVDTRIVCATHQDIDAMVAAGSF
REDLYYRLAEIVVRIPSLAERPGDAGLLARHFLRRYAGEMRSGVKGFAPDALAAIDAWGW
PGNVRELENRVKRAVIMADGARVTAADLDLAEPAGDSLPINLKAVREAADRKAIRHALAR
ADGNISGTARLLGISRPTLYDLMKAYDLQP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacgaggaagctgctgatcgtcgaggacgacctcgcgctccagcgccagctg
cgctgggcctatgaaggctatgaggtccatgtcgccgccgatcgcgagagcgcgatcgcc
gtgctgcgcgccgaggagcccgcggtggcgacgctcgacctcggcctgccgcccgatccc
gacggcaccagcgagggcttcgcgaccctccaggcgatcctggagctgaagcccgacacc
aaggtgatcgtcgcctccggccacggtgcccgtgaaagcgcgcggatcgcgatcgcggcg
ggggcatgggacttctatgccaagccgatcgacatcgacgcgctcggcctgatcgtcgcg
cgcgccttccacgtccatgcgctggaagcggagaaccgccggctcgcggaggctggatcg
agcaccgcgctcggcggcatgatcaccgccgcgccggagatgctgaaggtcacccgaacg
atcgatcgcgtcgccggcgccgacgtgtcggtgatgctgctcggcgcatcgggcaccggc
aaggagctgctcgcgcgcgggctgcacgaggccagcccccgcaggcgcggcgccttcgtc
gcgatcaactgcgcggcgatccccgagacgctgctcgagagcgagctgttcgggcacgag
aagggtgccttcaccggcgcggtcaagaccaccgaaggcaagatcgaggcggcgcatggc
ggcaccctgtttctcgacgagatcggcgacgtgccgctgccgctccaggtcaagctgctg
cgcttcctgcaggagcgggtgatcgagcggatcggcgggcgcaagccgattccagtggac
acgcgtatcgtctgcgcgacgcaccaggacatcgacgcgatggtcgccgccggcagcttc
cgcgaagacctctactatcgtctcgccgagatcgtggtgcgcatcccgtcgctcgccgag
cggccgggcgatgccggactgctcgcacggcatttcctgcgcagatacgccggcgagatg
cggagcggcgtcaagggcttcgcgcccgacgcgcttgccgcgatcgacgcctggggctgg
cccggcaacgtccgcgagctggagaaccgggtgaagcgcgccgtcatcatggcggacggc
gcccgcgtcaccgccgccgacctcgacctcgccgagcctgccggagacagcctgccgatc
aacctcaaggccgtgcgcgaggcggccgaccgcaaggcgatccggcacgcgctggcgcgc
gccgacggcaatatctccggcaccgcccggctgctcgggatcagccgccccaccctctat
gacctgatgaaggcctatgacctccagccgtaa
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