Sphingomonas cannabina: LZK98_06600
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Entry
LZK98_06600 CDS
T08607
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
scab
Sphingomonas cannabina
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_16
AAA_2
AAA
AAA_22
bpMoxR
MCM
Motif
Other DBs
NCBI-ProteinID:
UIJ46612
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Position
complement(1358055..1359185)
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AA seq
376 aa
AA seq
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MVAIPQADLAERTNVGAGASPRLGGHPVLSFDSGKHHSVGVRARAFVFSDPQSRALVPLI
EKTAPSEANILVIGETGTGKELVARYVHALSDRAQGPFIAVNCGAFSETLIEGELFGYEK
GAYTGAHIARPGWFEAANGGTLFLDEIGDLPLSLQVKLLRVLQEREVVRLGSRTPIPLDV
RVIAATNVDLHQSVAAGAFRADLFYRLQVVTVPLLPLRRRRADILPLARHFLQIYGDRIQ
PNRLDLSPSAEEALYRYDWPGNIRELENAIHRAALVCQDGLIQVEDLGLLPAGDTLALIG
YEEPGDSAAPANLEEIVRPMIAKLLDGGHDALLDRLISAVVTQTFEQHGSNQIKTAAALG
VTRNVVRTYLKNFGLI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcaattccacaggccgatctcgcagagcgaaccaatgtcggtgccggtgcctca
ccgcgccttggcggacacccggtcctgtccttcgattcgggcaagcatcattcggtgggc
gtgcgcgcccgtgcgttcgtcttctccgatccgcagtcgcgcgcgctggttccgctgatc
gagaagaccgcgccgagcgaagcgaacatcctggtgatcggcgaaaccgggaccggcaag
gaactggtcgcgcgctacgtccatgcgctgagcgatcgtgcgcaggggccgttcatcgcg
gtcaactgcggcgccttctccgagacgctgatcgagggcgagctgttcggctatgagaag
ggcgcctacaccggcgcccatatcgcgcggccgggctggttcgaggcggcgaacggcggc
accctgttcctcgacgagatcggcgacctgccgctgtcgctccaggtcaagctgctgcgc
gtcctccaggagcgcgaggtcgtccggctcggatcgcgcacgccgatcccgctcgacgtg
cgggtgatcgccgcgaccaatgtcgacctccaccagtcggtggctgccggggccttccgc
gccgatctcttctaccgcctccaggtggtgacggtgccgctgctgccgctccgtcggcgg
cgtgcggacatcctgccgctcgcccggcatttcctccaaatctacggcgacaggatccag
ccgaaccggctcgacctcagccccagcgcggaagaggcgctctaccgctacgactggccg
ggcaacatccgggagctggagaacgccatccatcgcgccgcgctggtatgccaggacggc
ctgatccaggtcgaggacctcgggttgctgcccgcgggcgatacgctcgcgctcatcgga
tatgaagagccgggcgatagcgccgcaccggcgaacctcgaggagatcgtgcggccgatg
atcgcgaagctgctcgacggcggccatgacgcgctgctggaccggctgatcagcgcggtg
gtgacccagacgttcgagcagcacggctccaaccagatcaagaccgccgccgcgctgggc
gtgacgcgcaacgtggtgcggacctatctcaagaacttcgggctgatctga
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