Sphingomonas cannabina: LZK98_12835
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Entry
LZK98_12835 CDS
T08607
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00260
Glycine, serine and threonine metabolism
scab00400
Phenylalanine, tyrosine and tryptophan biosynthesis
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01230
Biosynthesis of amino acids
Module
scab_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LZK98_12835 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
LZK98_12835 (trpB)
Enzymes [BR:
scab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
LZK98_12835 (trpB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
UIJ43967
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All DBs
Position
2668545..2669789
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AA seq
414 aa
AA seq
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MTDTASLPNSLRNQPDERGHFGRFGGRYVAETLMPLILDLEREYRAAKDDPAFQAEFDGL
LEHYVGRPSPLYYAERLTAHYREGAPAGLGAKIYFKREELNHTGAHKINNCIGQILLARR
MGKTRIIAETGAGQHGVATATVAARFGLPCTIFMGAKDVERQKPNVFRMKLLGAEVEPVT
SGAQTLKDAMNEALRHWVANVHDTFYIIGTAAGPHPYPELVRDFQAVIGKETRAQMLKAE
GRLPDLLIAAVGGGSNAIGLFHPFLDDPDVAMLGVEAAGHGIETGQHAASLTGGAPGILH
GNKTYLLQDEDGQITEAHSISAGLDYPGIGPEHSWLHESGRVEYLPITDRQALDAFQLCC
RAEGIIPALESSHALAALEAKAREMREDQIIVVNVSGRGDKDIFTVAEALGAGI
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacactgcttccctgcccaattccctgcgcaatcaaccggacgaacgcgggcat
ttcggccggttcggcggccgctacgtcgccgagacgctgatgccgctgatcctcgatctc
gagcgggaatatcgcgcggccaaggacgatcccgccttccaggcggagttcgacggactg
ctcgagcattatgtcggccgcccgagcccgctctattacgccgagcgcctgaccgcgcat
taccgcgagggcgcgccggccggcctgggcgccaagatctacttcaagcgcgaggagctc
aaccacaccggcgcgcacaagatcaacaactgcatcggccagatcctgctcgcccgccgc
atgggcaagacgcggatcatcgccgagaccggcgccggccagcacggcgtcgccaccgcg
accgtcgccgcgcgcttcggcctgccctgcacgatcttcatgggcgccaaggacgtcgag
cggcagaagcccaacgtgttccgcatgaagctgctcggcgccgaggtggagccggtcacc
tcgggcgcgcagacgctcaaggacgcgatgaacgaggcgctgcgccactgggtcgcgaac
gtccacgacaccttctacatcatcggcaccgccgccggcccgcacccctatcccgagctc
gtccgcgatttccaggccgtgatcggcaaggagacgcgcgcgcagatgctgaaggcggag
gggcgccttccggacctgctgatcgcggcggtcggcggcggatcgaacgcgatcgggctg
ttccaccccttcctcgacgatcccgacgtggcgatgctcggcgtcgaggcggcggggcac
ggcatcgagaccggccagcacgccgccagcctcaccggcggtgcgcccggcattctccac
ggcaacaagacctatctgctccaggacgaggacggccagatcaccgaggcgcattcgatc
tcggccgggctcgactacccgggcatcggccccgagcacagctggctgcacgagagcggc
cgcgtcgagtatcttccgatcaccgaccggcaggcgctggacgcgttccagctctgctgc
cgcgcagaaggcatcattcccgccctcgaaagctcgcacgcgctggcagctctcgaagcc
aaggcacgggaaatgcgcgaagatcagatcatcgtcgtcaatgtctccggccgcggcgac
aaggatatcttcaccgtcgccgaagcgctgggggcggggatatga
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