Sphingomonas cannabina: LZK98_13055
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Entry
LZK98_13055 CDS
T08607
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase family protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00521
Streptomycin biosynthesis
scab00523
Polyketide sugar unit biosynthesis
scab00541
O-Antigen nucleotide sugar biosynthesis
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LZK98_13055
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LZK98_13055
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LZK98_13055
Enzymes [BR:
scab01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LZK98_13055
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UIJ44007
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Position
2722547..2723095
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AA seq
182 aa
AA seq
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MFFAPTSLADAYLIRPDRRVDDRGYFARTMCYDEFAERGLVSDFVQQSLSVTAKAGTVRG
LHFQYPPYGEAKLVRCVRGAIQDIILDLRQDSPTYLRSEGFRLDAENGHQLYVPPGFAHS
FQTLVDDVEVTYLISAPYTPDAQGGLRYDDPELGIEWPLPVAAISPRDLAWPLIHPHAPP
AL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgcgccgacatcgctggcggatgcctatctgatccggcccgaccggcgggtg
gacgatcgcggctatttcgcgcgcaccatgtgctacgacgagttcgctgagcgcgggctc
gtcagcgacttcgtgcagcagagcctgtcggtgaccgccaaggcgggaacggtccgcggc
ctgcatttccaatacccgccctatggcgaggccaagctggtccgctgcgtccgcggcgcg
atccaggacatcatcctcgacctgcgccaggattcccctacctatctgcgatcggaggga
ttcaggctggatgcggagaacggacaccagctctacgtgccgccgggcttcgcccacagc
ttccagacgctggtcgacgatgtcgaggtcacctatctcatctcggcgccttacacgccc
gacgcgcagggcgggctgcgctacgacgatcccgagctcgggatcgagtggccgctgccg
gtggcggccatctcgccgcgggacctcgcatggccgctgatccacccgcacgcgccgccc
gccctgtga
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