Sphingomonas cannabina: LZK98_14990
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Entry
LZK98_14990 CDS
T08607
Name
(GenBank) ROK family transcriptional regulator
Organism
scab
Sphingomonas cannabina
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Gene cluster
GFIT
Motif
Pfam:
ROK
HTH_24
MarR
HTH_Crp_2
MarR_2
Motif
Other DBs
NCBI-ProteinID:
UIJ44364
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Position
3162730..3163950
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AA seq
406 aa
AA seq
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MTPPSRARPRLSGTNLERAADHNQRVTLHAIRVCGSLTRVELAGITGLTAPAIANITRRL
LDDGLIEEAGQRRGGRGQPPTKLVIRRDACYSIGVNIDRDHITVVLVDFSGHTLARVSEE
VSFALPDHVRSLYRRSIKKMLRQAGVEIGKVVGLGVAVPDDLGSVDLPGRPAAYAAWEGI
DMADLFAEPFDLPVFTENDAAAAAMGEMQLGLGQKYNSFFYILISSGLGGGLVVDGAYVR
GADGRSGELGFMRAPGSNGHGEQIQALVSLSGLARHLEGQGLALADAMGKPSADARVNAC
VTEWIERAARQLTVPLDAVNCLINPAVVLMGGRLPSHLLEQLAERTNALMREETNLFPAI
APVARAALSEDAPAVGAAILPFSHFLLPKPGALWKASGAGVADYAA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccccgtcccgcgcccgcccgcgcctgtccggcaccaacctcgagcgtgccgcc
gaccataaccagcgcgtgacgctgcatgcgatccgggtgtgcggctcgctgacccgggtg
gagctcgccggcatcaccggcctcaccgcgccggccatcgccaacatcactcgccgcctg
ctcgacgacggactgatcgaggaagccggccagcgccgcggcggacgcggccagcctccg
acaaaactcgtgatccgaagggacgcctgctactcgatcggcgtcaacatcgaccgcgac
catatcaccgtcgtgctggtcgatttttcgggccacaccctggcccgggtgtcggaggag
gtgagcttcgccctccccgaccacgtccgctcgctctatcgccgctcgatcaagaagatg
ctgcgccaggccggcgtcgagatcggcaaagtggtggggctcggcgtcgcggtgcccgac
gatctgggctcggtcgacctgcccggccgcccggccgcctatgccgcctgggaagggatc
gacatggccgatctcttcgccgaacccttcgaccttcccgtcttcaccgagaacgacgcc
gccgccgccgcgatgggcgagatgcagctcggcctcggacagaagtacaacagcttcttc
tacatcctgatctcgtccggcctcggcggcggtctcgtcgtcgacggcgcctatgtccgc
ggcgcggacgggcgcagcggcgagctcggcttcatgcgcgcgcccggcagcaacggccac
ggcgagcagattcaggcgctggtgtcgctctccggcctcgcccgccatctcgagggccag
ggcctcgcgctggccgatgcgatgggcaagccctccgccgatgcacgggtgaatgcgtgc
gttacggaatggatcgagcgcgccgcgcggcagctgaccgtaccgctcgacgcggtgaac
tgcctgatcaatccggcggtggtgctgatgggcggccgcctccccagccatctgctcgag
cagctcgccgagcggaccaatgcgctgatgcgggaggagacgaacctgttccccgcgatc
gcccccgtcgcgcgcgcggcactctccgaggacgcccccgcggtcggcgcggcgatcctg
ccgttcagccacttcctgctgcccaagcccggcgcgctgtggaaagcatcgggagcgggc
gtcgcggattacgcggcgtag
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