Sphingomonas cannabina: LZK98_16865
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Entry
LZK98_16865 CDS
T08607
Name
(GenBank) DUF3459 domain-containing protein
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00052
Galactose metabolism
scab00500
Starch and sucrose metabolism
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LZK98_16865
00500 Starch and sucrose metabolism
LZK98_16865
Enzymes [BR:
scab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
LZK98_16865
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GFIT
Motif
Pfam:
Alpha-amylase
DUF3459
Malt_amylase_C
VMAP-M4
Complex1_LYR
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
UIJ44707
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Position
3573319..3574926
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AA seq
535 aa
AA seq
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MEAAGGIDVTKRWWEAGCVYQVYPRSFQDSNGDGVGDLVGIRQRLDHIADLGVDAIWLSP
MFPSPMADFGYDVADYCGVDPLFGTIEDFDALLAAAHERGLRLLLDFVPNHSSDRHPWFV
ESRSSHASPKRDWYIWRDPAPDGGPPNNWTSDFGGSAWEYDPATGQYYYHAFLKEQADLN
WRNPELRRAMFDAMRFWLDRGVDGFRIDVLWHIVKAEGFPDNPVNPDYHPSMGEKFMVLQ
LNSTDQPEVHDLIAEMRALADSYGGGDERVLVGEVCLPLSKLVTYYGAQAKGVHLPFNFE
LIEAPWHARGIASFIDAYEAALPPGAWPNWVLGSHDARRVAARLGEAQARVAAMLLLTLR
GTPTLYQGDEIGIGEVVLRPDQVRDPRELREPGLGLGRDPARTPMAWDGSPNAGFTTGTP
WLPLHPDWPTRNVAAQREDPASMLSLYRRLLRLRRGHPALSIGSYASVEAEGDVLAYLRR
GGGEEFLVVLNLGGEPQAMPEIARDYAPLLSTIHGDLPADRTRLRPNEAILSIRR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagcgggaggtatcgacgtgacgaagcgatggtgggaggccgggtgcgtctat
caggtctatccgcgctcgttccaggacagcaacggcgacggcgtcggcgacctcgtcggc
atccgccagcggctcgaccatatcgccgacctcggcgtcgacgcgatctggctgtcgccg
atgtttccctcgccgatggccgatttcggctatgacgtcgccgattactgcggcgtcgac
ccgctgttcgggacgatcgaggatttcgacgcgctcctcgccgccgcgcacgagcgcggg
ctcaggctgctgctcgacttcgtgcccaaccacagctccgaccggcacccctggttcgtc
gagagccgctcgtcgcacgcctcgcccaagcgcgactggtacatctggcgcgatcccgcc
cccgacggcgggccgcccaacaactggacgagcgatttcggcggttcggcctgggagtac
gacccggcgaccggccaatattactaccacgcgttcctgaaggagcaggccgacctcaac
tggcgtaacccggagctgcgccgggcgatgttcgacgcgatgcgtttctggctcgaccgc
ggcgtcgacggcttccgcatcgacgtgctgtggcacatcgtcaaggccgagggctttccc
gacaatccggtcaacccggactatcacccgtcgatgggcgagaagttcatggtgctccag
ctcaactcgaccgaccagccggaggtgcacgacctgatcgccgagatgcgcgcgctcgcc
gacagctatggcggcggcgacgagcgggtgctggtcggcgaggtctgcctgccgctgtcg
aagctcgtcacctattacggcgcgcaggcgaagggcgtgcacctgcccttcaacttcgag
ctgatcgaggcgccgtggcacgcacgcggcatcgcgagcttcatcgatgcctatgaggcc
gcgctgccgcccggcgcctggcccaattgggtgctggggagccacgacgcgcgccgcgtc
gccgcgcggctgggcgaagcgcaggcgcgggtcgcggcgatgctgctgctcacgctgcgc
ggcacgccgacgctctaccagggggacgagatcgggatcggcgaggtggtgctccgcccc
gaccaagtgcgcgatcccagggagctgcgcgagcccggcctaggcctcggccgcgatccc
gcacggacgccgatggcgtgggacggctcgcccaacgccggcttcaccaccggcacgccc
tggctgcctctccatcccgactggccgacccgcaatgtcgcggcgcagcgggaggacccg
gcatcgatgctcagcctctaccggcgcctgctccgcctcaggcgcggccacccggcgctg
tcgatcggcagctacgcctccgtcgaggccgagggcgacgtgctcgcctatctgcggcgt
ggcggcggggaggagttcctggtcgtattgaacctcggcggcgaaccgcaggcgatgccg
gagatcgcacgggactacgcgccgctcctctcgaccattcacggcgacctgcccgcggac
cgcacgcggctgcggccgaacgaagccattctatcgatccgacgctag
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