Sphingomonas cannabina: LZK98_18545
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Entry
LZK98_18545 CDS
T08607
Name
(GenBank) beta-galactosidase
Organism
scab
Sphingomonas cannabina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD2
BetaGal_dom2
BetaGal_dom3
Glyco_hydro_42
Cellulase
BetaGal_gal-bd
Motif
Other DBs
NCBI-ProteinID:
UIJ45022
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All DBs
Position
3930591..3933638
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AA seq
1015 aa
AA seq
DB search
MAVDAFKIKLTPLALLLAAALLPHEASAQTARQTENLSAPVKNFGRVSYDARSLMIDGKR
LVIWSSEFHPFRLPSPDLWRDVLQKMKASGFNTVALYFDWGYHSPKQGVYDFTGIRDVER
VLTMAEEEGLYVITRAGPYVNAELTRGGFPGWLVNQRGRARTDDPAYLAAADEWLTQVNA
IIARHQINGDGKGHRGTVILHQIENELALTTPAQRRYMDHLYAKARVDGITVPIFHNDQG
RNGYWVPESSTVPNVVKGPNDLYAFDGYPGGTCTVAGRPTRGSAAPDWGFYGPGGAKGGA
SASPDTPGFLAEFGGGWFDYWGSNGGYECNAIQRGKRFQRVFYGTNLANGIDIQSFYMGF
GGTSWGWLAAPVVFTSYDYGAAISEARELRPKAEELKQLAGLIASVPDLAGMVPAGPATA
SSPDIQVYHNRSLESDARFLMVTHRPSNAATDDRFTITADLPDGRYSFPQAEPMRLDGFD
AKWLVAGVTLGGQRLVYSTSELQAAIQQDGGDLMLLYGRAGERGETVLRYSAAPTVTVIE
GDVRHRFDASKGDLMLDYAHAGLARVRIEGGGRPPLTLLLTDEAGGAQFWRHDTAAGPVL
VRGPALVRAAGAQGSTLALTGDTAAATPLELWAPARLRTVTWNGARVELADGAAGSRRAT
RPLAGPADFVLPALASWKVKAGSPEAAPDFDDSGWLAIDNRAYASITARPDGQPNMLMDA
YGFHEGDVWYRGRFAGGPNAERIRLYYGAGGSGLVQVFLDGRFIGQGETPGGLPRPITTG
VAEFVLPDAARAPGEHVLSVMVRNNGHNWDLDSDDFHKEARGLISVSVEPRAGPSFAVPI
AWKIQGRRGGEELADPIRGVANSGGLYGERVGWHLPGFDDSGWTATRLPAAKAQPGTSWY
RTEFTLAVPKGQDATIAVQFGDPAKPRSPVDYRALLFVNGWNMGQFIAHVGPQRIFPIPE
GILNHRGRNHIALAVTSDGKPGNALEEVRLVTLRNVKGGIPVRVVEAPASPSELR
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
gtggcggttgatgccttcaagataaagttgacgccgctcgccctgctgcttgccgcagca
ctgctgccgcacgaggcctcggcgcagaccgcccggcagaccgagaacctctccgcgccg
gtcaagaacttcggccgtgtctcctatgacgcgcgttcgctgatgatcgacggcaagcgg
ctggtgatctggtcgagcgagttccaccccttccgcctgccgagccccgacctgtggcgc
gacgtgctccagaagatgaaggcgagcgggttcaacaccgtcgcgctctatttcgactgg
ggctaccacagcccgaagcagggcgtgtacgacttcaccggcatccgcgacgtcgagcgg
gtgctgacgatggcggaggaggaagggctctacgtcatcacccgcgccggcccctatgtg
aatgcagagctgacgcgcggcggcttccccggctggctggtcaaccagcgcgggcgcgcg
cgcaccgacgatcccgcctatctcgccgccgccgacgaatggctgacgcaggtgaacgcg
atcatcgcgcggcaccagatcaacggcgacggcaagggccaccgcggcaccgtgatcctg
caccagatcgagaacgagctggcgctgaccaccccggcgcagcggcgctacatggaccat
ctctatgccaaggcgcgtgtcgacggcatcaccgtgccgatcttccacaatgatcagggc
cgcaacggctattgggtgccggaaagctcgaccgtgccgaacgtggtgaaggggccgaac
gacctctacgccttcgacggctatcccggcggcacctgcaccgtcgccggccggccgacc
cggggatcggcggcgcccgactggggcttctacggcccgggcggggccaagggcggcgcc
tccgcctcccccgacacgccgggcttcctcgcggaattcggcggcggctggttcgactat
tggggatcgaacggcggatacgagtgcaacgccatccaacgcggcaagcggttccagcgc
gtgttctacggcaccaatctcgccaacggcatcgacatccagagcttctacatggggttc
ggcgggacgagctggggctggctggccgcgcccgtcgtcttcaccagctatgactacggc
gccgccatctcggaggcgcgcgagcttcgccccaaggccgaggagctgaagcagctcgcc
gggctgatcgcctcggtccccgacctcgcgggaatggtgccggccgggccggcgaccgcc
tcctcgcccgatatccaagtctatcacaaccgtagcctggagagcgacgcgcgcttcctg
atggtgacgcaccggccgtccaatgccgcgaccgacgaccgcttcaccatcactgccgac
ctgcccgacggccgctacagctttccgcaggcggagccgatgcggctcgacggcttcgac
gcgaaatggctggtggcgggggtgacgctgggcggccagcggctggtctattccacctcc
gagctgcaggcggcgatccagcaggacggcggcgacctgatgctgctctacggccgcgcc
ggcgagcgcggcgagactgtgctgcgctatagcgccgcgccgacggtgacggtgatcgag
ggcgacgtccgccaccgtttcgacgcgtcgaaaggtgacctgatgctcgactatgcccat
gccggcctcgcccgcgtgcgcatcgagggcggagggcggccgccgctcaccctgctgctg
accgacgaggctggtggcgcgcagttctggcgtcacgacaccgcggccgggccggtgctg
gtacgcggcccggcgctggtccgcgcggccggagcgcagggctcgacgctggcgctcacc
ggcgacaccgcggccgcaacgccactcgagctatgggcgccggcacgactgcgcaccgtc
acctggaacggcgcgcgcgtggagctggcggacggtgccgccggcagccgcagggcgaca
cggccgctcgccggaccggcggacttcgtcctgccggcgctcgccagctggaaggtaaag
gccggctcgcccgaggcagcgcccgatttcgacgacagcggctggcttgcgatcgacaac
cgcgcctatgccagcatcaccgctaggcccgacggccagcccaacatgctgatggacgcc
tatggcttccacgagggcgacgtctggtatcgcggccgcttcgccgggggaccgaacgcg
gagcgcatccggctctattacggcgcgggcggatcggggctggtgcaggtcttcctcgac
ggcaggttcatcggtcagggcgagacgcccggcgggctgccgcggccgatcaccaccggg
gtcgcggagttcgtgcttcccgatgcggcgcgggcgcccggcgagcatgtgctttcggtg
atggtccgcaacaacggccacaactgggatctcgactccgacgatttccacaaggaggcg
cgcgggctgatctcggtctcggtcgagccgcgggccggccccagcttcgccgtgccgatc
gcgtggaagatccagggccgccgcggcggcgaagagctggccgacccgatccgcggcgtc
gccaacagcggcggcctctacggggagcgcgtcggttggcacttgccgggcttcgacgac
agcggctggacggcgacaaggttgccggccgccaaggcacagccgggcaccagctggtat
cggaccgaattcaccctcgccgtgcccaagggccaggatgccacgatcgccgtccagttc
ggcgatcccgccaagccccgctcgccggtcgactatcgcgcgctgctgttcgtgaacggg
tggaacatggggcagttcatcgcccatgtcggtccgcagcggatttttccgatcccagag
ggcatcctcaaccatcgcggccgcaaccatatcgcgctggcggtcacgtcggacggcaag
cccggcaatgcgctggaggaagtccggctggtgacgctgcgcaacgtcaagggcggaatc
cctgtccgcgttgtcgaggcgcccgcgagcccatccgagctccgatag
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