Stomoxys calcitrans (stable fly): 106083770
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Entry
106083770 CDS
T07664
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03013
Nucleocytoplasmic transport
scac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106083770
09122 Translation
03013 Nucleocytoplasmic transport
106083770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scac03019
]
106083770
03041 Spliceosome [BR:
scac03041
]
106083770
Messenger RNA biogenesis [BR:
scac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106083770
Spliceosome [BR:
scac03041
]
Complex C
Other components
EJC/TREX
106083770
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106083770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
MBA1
Motif
Other DBs
NCBI-GeneID:
106083770
NCBI-ProteinID:
XP_013102475
UniProt:
A0A1I8PR36
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MPNAKMIKSTDFTGLHAAFLKSLKDAFEKNDVQILRKSYDSYSNNSDHDKKSPMDQAFRE
ILMFKLSSDVDMIGKLVKLSVEAVRAEIVSVTIPVVLLGDIFETVTLDKCEKIFNYVEEM
VEVWKEEIFFSSCKNNILRMCNDLLRRLSRAQNTVFCGRILLFLSKFFPFSERSGLNIVS
EFNLENVTDYGVDGKDLDDTLEDIEDIPIKIDYNLYCKFWSLQDFFRNPNQCYSKASWKM
FQIHATTVLESFSSFKLEDLRSASAQLEDNNDDMNDKMDVDINYTMDLKNEIDQSVQKVD
HFFAKFLTNPKLLALQLSDGNFRRAVLVQFLILFQYLQLTVKFKAESNTLTQAQSDFIKE
TEAKVYLLLEETPPNGKRYSRTVKHMLQREEMWNNWKNDGCKEFKKPEEITSDDKPPPAK
RERKTLGESLKEANRQGKFFLGNEVLTRLWNYCPDNLQACKSEERNFLPQVETYLESSRD
KNDTSFEWRALRLLARQSPHFFTFINSPSYKTSDYLDAVRKRLTKERLDAAKQAAAISNG
TSTVVSSGEIQETLQEQETEPEGNDEGVLEGEEETTDLDKAEEDNNTHSKPLTATREQIE
ELAPLIGDDWKKLGKKLGYAADELLYFEESAERDGGCVSMLVNWFADDDDASLDNLAYTM
EGLEINTAAKAVKAIIERSAKYAQRDVDEEEKVETL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgctaaaatgataaagtcgacggattttaccggcctccatgcggcattcttg
aaatctctaaaggacgcttttgagaagaatgatgtacagatcttgagaaagtcctacgac
agttatagcaacaattccgatcatgacaagaagtctccaatggaccaggcatttcgtgag
atactcatgttcaagctcagcagtgatgtcgacatgataggtaaattggtaaagctctct
gtggaagccgttcgggcagagattgtctcagtcactatacctgtggtcctattgggcgac
atattcgaaacggttaccttggataaatgcgagaaaatatttaattatgtggaggaaatg
gtggaagtgtggaaggaggaaattttcttctcgtcctgcaaaaataacattctaagaatg
tgcaatgacttgttgcgaagactaagccgtgcccagaacactgtcttctgcggacgcata
ttactctttctgtccaaattctttcccttctcggaaaggtccggcttgaatattgtgtcg
gaatttaatttagaaaatgtaacagactatggtgtggatggcaaagatttggacgacacg
ttggaggacattgaagacatacccattaagattgattacaatttgtattgtaaattttgg
tccttgcaagacttcttccgcaatcccaatcaatgctacagcaaggcgtcctggaaaatg
tttcaaattcacgccaccacagtgttggagtcattttccagtttcaaactggaagatctg
cgctctgcatcggcacaactggaggacaacaacgatgatatgaacgataaaatggatgtg
gatataaactacacaatggacttgaaaaatgaaattgaccaatcggtgcaaaaagtggac
catttctttgccaaattcctaactaatcccaagctattggctctacaattgtcggatggc
aattttcgacgcgctgtactggtacaattccttatactctttcagtatttgcagttgaca
gtgaaatttaaagcggaatcaaatacattgacgcaggcccaatctgatttcatcaaagaa
acggaagcaaaagtttacctacttctggaagagaccccacccaatggaaaacggtattcg
cgtacggttaaacatatgctgcagcgcgaagaaatgtggaacaattggaaaaacgatgga
tgcaaagagtttaagaagccggaagaaatcacatctgacgataaaccacctccagccaag
cgagagcgcaagacattgggagagtctctaaaggaagcaaacaggcaagggaaattcttt
ttgggcaatgaggtgttgacacgtctctggaactactgtcctgataatttacaagcatgt
aaaagcgaagagcgcaacttcttaccccaggttgagacatatctagaaagttctcgcgac
aaaaacgatacatcattcgaatggcgcgcattgcgtttattggcccgacagtcacctcac
ttctttaccttcattaactcgccctcctacaaaacgtccgactatttagacgctgtgcga
aaacgtctgactaaagagcgtttagatgcggccaaacaagcggcagcgatttcgaatgga
acctccaccgtcgtctcctcgggagaaattcaagaaactctacaagaacaggaaacagaa
cctgaaggcaacgacgaaggtgttctcgagggcgaggaggagaccaccgatttggacaag
gccgaagaggacaacaacacacactcaaaacccctcaccgcaaccagagaacaaattgaa
gagttggctcccctaattggagacgactggaaaaaacttggtaagaagctgggctatgca
gcagatgaattgctttacttcgaagaaagtgcggagcgtgacggaggctgtgtctcaatg
ttggttaattggtttgccgacgacgacgacgccagtctcgacaatttggcctacaccatg
gaaggtttggaaattaataccgcagccaaggctgtaaaagccataatagaacgttcagct
aaatacgctcagagagatgtagacgaggaggaaaaagtggaaacactgtaa
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