Stomoxys calcitrans (stable fly): 106085900
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Entry
106085900 CDS
T07664
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106085900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scac03400
]
106085900
Enzymes [BR:
scac01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
106085900
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
106085900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
BRCT_2
DNA_ligase_A_C
BRCT
BRCT_3
Motif
Other DBs
NCBI-GeneID:
106085900
NCBI-ProteinID:
XP_013105820
UniProt:
A0A1I8PP02
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MEISETIKFRDICLILNRIAKTDNKDKKGRIVKQYYESFCKHRERFREEQKMKPDEPETG
RSSFYCILRCLIPNADMARSPYGLKIHTLGRVYIKVLQLGSESKEAEILEARRFSGIHGD
YADKVFRILKPRCSNESSKLTLKEVHDMLDTVANENILNTEKVLIHLFQVASAEEQMWFV
RLLLKSMHLGIADQRIFAILHPQAKDVYQACSNLAKLCCCLADNKFGTTNGESGDGPAQL
VAAIIPFEHIRPQLCEIFPGNITSLMASDVLYMETKMDGERFQLHYKDNVFKYISRNGVD
YTESFGSSYEQENKLTSKLQHLLPIGMETIILDGEMMVWDGDEKKFREKTENTDVKHLKA
DRNWQPCFVVYDLLYWNSQSLLGIPYIQRMHKLRNLLREEEGVLQIMKSEKISNPEDFRR
MFQVALDNRQEGVVLKKQNAIYRPGCRNGGGWFKVKADYIDGLTTEFDLLVIGGFYNRAR
TFVESFLLGVLKYASSESYEVYSVGKVSNVTQQRVVLNNTLKSHWHLLSEEQPPMWYHYR
PKSAEGRPDVWIEPRNSVVLQIKATDLNPSGAFYLNLALHFPRIQAWRNDKSWTECLTLE
EYNQLKQNARGGIKKIVKRQISLEDFIGDRVKRRKLTPAEKRKMGLQSYEKRFDPQSVDK
ISDLLKGFSVCILSAALSRGFTPEYLKTLVVQNGGTIVENPLPNKSSCIVVAGDLNYRVQ
TLSKAQKYDIVSMDWLIRSCRKQTIAIKPLDMVSTTQEVKEQFAICFDKYGDSFKDFVSS
RELKRICDAMCMDEVPELDDKDLHELEELIYPVKNLNFYRNTWSNFYTIEPDSARAQLHY
QWHGGNVVDDRSLDSESGVNNLSKISYVFINLQQFDKTDFLQWLRERFTSSLLSNLQIVN
INWILESHKARMLLDIKEFTWHDFD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggaaatttcagagactataaagtttcgggatatttgtctaatattaaatcgcattgct
aaaacggacaataaagataagaagggtagaattgttaaacaatactatgaatcgttttgt
aaacatcgcgagagatttagggaagaacaaaaaatgaaaccggatgagcctgagactgga
cgtagtagcttttattgcattttgcgttgcctcataccaaatgctgatatggcccgatca
ccctatggccttaaaatacacacacttggaagagtctatataaaagttttgcaattgggt
tccgaatccaaagaggctgaaatattggaagctcgtagattttccggcattcatggcgat
tatgcagacaaagtttttcgtatacttaagcctagatgtagcaatgaatcaagtaaattg
actctgaaggaagtgcatgatatgctagatactgtagccaatgagaatattttaaatact
gaaaaagttctaattcaccttttccaagtggcctcggcagaggaacaaatgtggtttgta
cgtctactattgaaatccatgcacttgggcattgcagatcaacgtatatttgctatttta
catccccaagcaaaggacgtttatcaagcctgcagtaatcttgcaaagctatgttgctgt
ctggcagacaacaagtttggcacaactaatggagagtcgggagatggaccagcgcagttg
gtagctgccataatacccttcgaacatatacgaccacaattgtgtgagattttccccggg
aacattacatctctgatggcttccgatgttttgtatatggaaactaaaatggatggtgaa
cgctttcaattgcattataaggataatgtctttaagtatatatcgcgtaatggtgtagat
tatacggaaagttttggctcctcgtatgaacaagaaaataaattgaccagcaaattacaa
catctattgcccattggcatggaaaccattattttggatggcgaaatgatggtctgggat
ggggatgagaagaaatttcgtgaaaaaactgagaataccgatgtcaagcatttaaaagcc
gaccgtaattggcagccctgttttgtggtctatgatctgctgtattggaatagtcaaagt
cttttgggtataccctatatacagagaatgcataaattgcgaaatctattgcgtgaggag
gagggagtgctgcaaataatgaaaagtgaaaagatttcaaatccggaggattttagacgc
atgtttcaagtggctttggacaatcgacaggaaggcgtggtcttgaaaaaacaaaatgcc
atatatcggccgggatgcaggaatggagggggctggtttaaggtgaaggcggattacata
gatggcttgaccacagagtttgatcttctggttattggtggcttctataatagagcacgt
acttttgttgagtcatttctcttgggtgttctaaaatatgcctcctcagaaagttatgaa
gtctattcggtgggcaaggtaagcaatgtcacccaacaacgtgttgtcttaaacaatacc
ttgaaaagccactggcatttactgtccgaagaacaacctcccatgtggtatcactatcga
ccaaagagtgccgagggtcgtcctgatgtttggattgagccccgaaattctgtggtgcta
caaatcaaagccaccgatttaaatccctcgggagcattttatttgaatttggctttgcat
tttcctcgcatacaagcatggcgcaatgataaatcctggactgaatgtctcacactggag
gaatataatcagctaaaacaaaatgctagaggtggtattaagaagattgttaagaggcaa
attagtttagaggacttcataggggatcgtgtgaaacgtagaaaactaacgccagctgaa
aagcgtaaaatgggtctgcagtcctatgagaagcgttttgatccacaaagtgtggataaa
atctctgacttacttaagggctttagtgtgtgtattctaagtgctgccttgagtcggggc
tttacccccgaatatctaaaaactttagtggtccaaaatggtggcaccattgtggaaaat
cctttgcccaataagtccagttgtattgtggtggcaggcgatctcaactatcgtgtacaa
actctatccaaggcccagaagtatgacattgtcagcatggactggttaatacgttcctgt
cgcaaacaaaccattgccatcaaacctcttgacatggtctccaccacccaagaggtgaag
gaacagtttgccatatgttttgataaatacggtgatagttttaaggattttgtaagttcc
cgcgaattaaagcgcatctgtgatgccatgtgtatggatgaagtacctgaattagatgat
aaggatttacatgaactggaggagctgatttatcctgtcaaaaatctgaatttctatcgc
aatacatggtctaatttttataccattgaaccagattctgctcgagcccaattgcattat
caatggcatggtggtaatgtggttgatgatcgtagtttggatagcgaaagcggagttaat
aatttatcaaaaatatcctatgtgtttataaatctacaacagtttgataaaactgacttc
ctgcaatggttaagggagcgtttcacctcatctctcttatccaatttacaaattgttaac
attaattggattctagaatcgcacaaggcaagaatgttgctggatatcaaggagttcaca
tggcatgattttgattag
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