Stomoxys calcitrans (stable fly): 106089785
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Entry
106089785 CDS
T07664
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03022
Basal transcription factors
scac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106089785
09124 Replication and repair
03420 Nucleotide excision repair
106089785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scac03021
]
106089785
03400 DNA repair and recombination proteins [BR:
scac03400
]
106089785
Transcription machinery [BR:
scac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106089785
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106089785
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
VWA
Motif
Other DBs
NCBI-GeneID:
106089785
NCBI-ProteinID:
XP_013111223
UniProt:
A0A1I8QC55
LinkDB
All DBs
Position
Unknown
AA seq
422 aa
AA seq
DB search
MDHGDEEDAKEYRWETGYEKTWEAIKEDDDGLLDGAIADIIQKAKRKRQAQKTMQNKLGM
MRHLYLMLDCSESMTVPDLKPTRLLCTLKLLERFIDEFFDQNPISQMGLIVLKGKRAEKI
TELTGTAKLHLKALEGLQKINLTGEPSLQNGLDLALKTLKVVPSHASREVLIIMGSLTTC
DPVDINITIDALKQESIRCSVISLSAEIHVCRYLTQQTGGSYGAVLDDSHYRDQLLSHVD
PPPAAQTQENSLIKMGFPHARQDEGKEKDPPLSMCMCHIENADEPSKISSGGFHCPQCVS
KYCELPVECQTCGLTLVSAPHLARSYHHLFPVQNFTELVYNGQAAICYACQKPLTEAADK
NVYRCEACSQIYCLDCDIFIHETLHTCVGCVTIPGAAAQVHARKPQPPPMGMMLGSSLGQ
RF
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggatcatggtgatgaagaggatgcaaaggagtatcgctgggagaccggctatgagaaa
acatgggaggctattaaggaagacgatgatggcctgttggatggtgccattgcggatatt
attcaaaaggccaagaggaagaggcaggcccaaaagacaatgcaaaataaattgggcatg
atgagacatttgtacttgatgttggattgctctgaatcaatgacagtgccagatttaaaa
cccacaagacttttatgtaccctaaagcttttggaaagatttattgatgagtttttcgat
cagaatcctataagccaaatggggctaatcgttttgaagggtaaacgtgcggaaaagatt
actgagttaactggaacggccaaattgcatcttaaagccttggaagggttgcagaaaatt
aatcttactggagagccttcgttgcaaaatggtttggatttggcattgaagactctaaaa
gttgtaccttcgcatgcttccagggaagttttaataattatgggttcacttaccacatgt
gatccagtagacatcaatataacgattgatgctcttaagcaagagagtatacgttgttcg
gttatttcgctatcagcagaaatacatgtctgccgatatttgacacaacagactggtggt
tcatatggagctgttttggatgattcacactatcgggatcaacttctttcgcatgtagat
ccgccgccagcagctcaaacacaagaaaattccttaataaaaatgggttttccgcatgca
cgtcaggatgagggcaaagaaaaggatccacctttgtcaatgtgtatgtgtcacattgaa
aatgccgatgagcccagcaaaatttcttctggaggcttccattgccctcagtgcgtgagc
aaatattgcgaattgcctgtggaatgtcagacttgtggtttgaccttagtttcggcacca
catttagcccgttcctatcatcacttgttcccggtgcagaattttacagaacttgtttat
aatggtcaggcggcgatatgctatgcttgccaaaaaccacttacggaagccgctgacaag
aatgtttaccgctgtgaggcatgctctcagatatactgtttggattgtgatatatttata
catgagacattgcacacctgtgttggctgtgtaacaatacccggtgcagctgcacaagtt
catgctcgaaaaccgcaaccaccgcctatgggaatgatgttgggttcatcgctgggtcaa
cgtttttag
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