Stomoxys calcitrans (stable fly): 106094045
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Entry
106094045 CDS
T07664
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
scac
Stomoxys calcitrans (stable fly)
Pathway
scac03022
Basal transcription factors
scac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
scac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106094045
09124 Replication and repair
03420 Nucleotide excision repair
106094045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scac03021
]
106094045
03400 DNA repair and recombination proteins [BR:
scac03400
]
106094045
Transcription machinery [BR:
scac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106094045
DNA repair and recombination proteins [BR:
scac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106094045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
106094045
NCBI-ProteinID:
XP_013116672
UniProt:
A0A1I8P8E8
LinkDB
All DBs
Position
Unknown
AA seq
497 aa
AA seq
DB search
MNDFKSSSSSRHGGSSSSAAQSSLLVSKPANLQCKDFQEYLRTRNPETLEKLYNYPTICL
AVYREMPEIARQFVIRILFVEQPVPQAVVASWGSQYYAKEQAVSTSILTELNVWRTTAIP
GGLSAWELCPTFKKNLKIALLGGGKPWSMSHTLEKDSKPRDIAFLDQYAMSRWRCVLHYM
VGTGGANKAQGSEVISPDAVRILLHANLMKRDETGITITRQGFQFLLLDTQSQVWHFMLM
YLDTCEERGLSLPECLSMLFQLSFSTLGRDYSSEGMNAKMLAFLQHLREFGLVFQRKRKE
GRFYPTRLALNVTNKAATVPAVILEDEKSQESGYIVVETNYRVYAYTDSPLQVAVLGLFT
ELLYRFPNLVVGVLTRDSVRQALRGGITADQIISYLEQYSHPNMKLTESAIKSKSPLPPT
VVDQIKLWEMERNRFTYTEGVVYNQFLSQADFVTLRDYAQSISVLVWQNERTRTMVVTKN
GHDDVKKYWKRYSKSGS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttcaaatcgtcgtcctcatcacgccatggcggatcatcttcatcagcagca
cagagttccttgctggtctcgaaaccagccaacttacaatgtaaagatttccaagaatac
ctacgaaccaggaatccagagacactggaaaagctctataattatcccacaatttgttta
gcagtatacagggaaatgccagaaattgcaaggcaatttgtaatacgcatattatttgtg
gaacagcccgtaccacaggctgtggtggcttcttggggttctcagtattatgccaaagag
caagctgtttccactagtattttgacggaactcaatgtttggcgcaccactgccatacca
ggaggtttatcagcatgggaattatgccccacttttaaaaagaacttaaaaattgctctt
ttgggtggtggcaagccatggtccatgtctcatacgttagaaaaagattccaagcctcga
gatattgccttcttggaccaatatgccatgtctagatggcgttgtgtattgcactatatg
gttggaactggtggagccaataaagcccaaggtagtgaagttataagtcccgatgcggtg
agaattcttttacatgccaatttaatgaagcgagatgaaactggcatcaccataacacgc
caaggttttcaatttctgctgctggacacccagtctcaggtgtggcattttatgctaatg
tatttggacacctgtgaggagagaggactatcactacccgaatgtttgagcatgttgttc
caattgagtttttccacattgggcagagactacagttcggaaggaatgaatgctaaaatg
ttggcatttcttcaacatttgcgagaatttggtttggtatttcaacgaaaacgtaaggag
ggtaggttttatcccacccgtctggcacttaatgttacaaacaaggcggccactgtacct
gccgtaatattagaggatgaaaaatcacaagaaagtggttacatagttgtagaaaccaat
tatcgtgtgtatgcttataccgactcacctttacaagtggctgtactgggtctatttacc
gaattactttatcgatttcccaatctggtggtaggagttcttaccagagattcagtgcgc
caggctttaagaggtggcattacagcggatcaaataattagctatttggagcaatattcc
catccaaacatgaaattaaccgaatcagctataaaatcgaaatctccattgccgcccaca
gtggtggatcaaatcaaactatgggaaatggaacgtaatcgtttcacctacaccgagggc
gtggtgtacaatcaatttttatcgcaggctgattttgttaccttgagggactatgcccaa
tccataagtgtgctggtgtggcaaaatgaacgcacacgaacaatggtggtcaccaagaac
gggcatgacgatgtgaagaaatactggaaacgttattcaaagagtggcagttaa
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