Streptomyces cadmiisoli: DN051_11425
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Entry
DN051_11425 CDS
T07301
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
scad
Streptomyces cadmiisoli
Pathway
scad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DN051_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scad03019
]
DN051_11425
03400 DNA repair and recombination proteins [BR:
scad03400
]
DN051_11425
Enzymes [BR:
scad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DN051_11425
Messenger RNA biogenesis [BR:
scad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DN051_11425
DNA repair and recombination proteins [BR:
scad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DN051_11425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AWW37171
UniProt:
A0A2Z4IVP6
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All DBs
Position
2731340..2733505
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AA seq
721 aa
AA seq
DB search
MEHTSNADLRAEADTVLARLVGDPTGTARLREDQWRAIEALVAERRRALVVQRTGWGKSA
VYFVATSLLRARGSGPTVIVSPLLALMRNQVDAAARAGIHARTINSSNTEEWDAVQAEIT
AGEVDVLLVSPERLNNPDFRDQVLPELAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
TDLPQGVPVLATTATANARVTADVAEQLGTGGTSDALVLRGPLDRDSLSLGVLQLPDAAH
RMAWLADHLDELPGSGIIYTLTVAAAEEVTAFLRHRGHTVSSYTGKTENADRQQAEDDLL
GNKVKALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWEYFASLAFPSEELVRRTLDVLTRADRPVSLPALEPLVELRRSRLETMLKVLDVDG
AVRRVKGGWVATGQPWTYEAERYDWVARQRRTEQQAMREYAATSGCRMEFLQRQLDDEGA
KPCGRCDNCAGARFAVDTSTVALDAARVDLARAGVEVEPRRMWPTGLPAIGIDLKGRIPA
GEQATSGRALGRLSDIGWGNRLRPMLASQAPDGPVPDEVANAVVGVLADWAKGPGGWASG
AADAPARPVGVVTVASRTRPALIASLGARIAEIGRLPLLGSVDYAVDSPPVPRSNSAQRL
KALDGALTVPPALAAALAEAGGPVLLVDDFTETGWTLAVVARMLRRAGAEEVLPLVLGIQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcaacgcggatctccgggcggaggccgatacggtcctcgcccggctc
gtcggggaccccacgggcactgccaggctgcgcgaggaccagtggcgggcgatcgaggcg
ctcgtggccgagcggcgccgggccctggtggtgcagcgcacggggtggggcaagtccgcg
gtctacttcgtggcgacctcattgctgcgcgcccgcggcagcggccccacagtgatcgtc
tcgccgcttctcgcgctgatgcgcaaccaggtcgacgccgccgcccgagccggtatccac
gcgcggaccatcaattcctccaacaccgaggaatgggatgccgttcaggcggagatcacc
gccggtgaggtcgacgtcctgctcgtcagccctgaacggctcaacaacccggacttccgg
gaccaggtcctgcccgaactcgccgccgcgaccggcctcctcgtcgtggacgaggcgcac
tgcatctccgactggggtcacgacttccgccccgactaccgccggctgcggaccatgctg
accgacctgccgcaaggtgtgccggtgctcgccaccacggccaccgccaacgcgcgcgtg
acggcggacgtcgccgagcaactcggcacgggcggcacgtcggacgcgctggtgctgcgc
ggcccgttggaccgcgacagtctgagcctgggcgtgctgcagctgccggacgcggcacac
cgtatggcctggctcgccgatcacctcgacgagctgccgggctcgggaatcatctacacg
ctcaccgtggccgccgccgaggaggtcaccgcgttcctgcgccaccgcgggcacaccgtc
tcctcgtacaccgggaagacggagaacgccgaccgccagcaggccgaggacgacctgctc
ggcaacaaggtgaaggcgctggtcgcgacctccgccctcggaatgggcttcgacaaaccc
gatctcggcttcgtggtgcacctcggctcgccgtcctccccgatcgcctactaccagcag
gtgggccgcgcgggccgcggcgtggagcacgcggaggtccttctcctgcccggcaaggag
gacgaggcgatctgggagtacttcgcctccctcgcgttcccgtccgaagaactggtgcgc
cgcaccctggacgtgctcacgcgcgcggaccggccggtgtcgctgcccgccctggagcct
ctcgtcgaactgcgccgctcccggctggagaccatgctcaaggtgctcgacgtggacgga
gcggtacggcgcgtcaagggcggctgggtcgccacgggtcagccgtggacgtacgaggcg
gagcgctacgactgggtggcccggcagcgcaggaccgagcagcaggcgatgcgcgagtac
gcggcgacatcgggctgccgcatggagttcctgcaacgccagctcgacgacgagggggcc
aagccctgcggacgctgtgacaactgcgcgggggctcggttcgcggtggacacgtcgacg
gtggcgctggacgccgcgcgggtcgacctggcacgggcgggcgtcgaggtggaaccccgc
cgcatgtggccgaccggcctgccggccatcggcatcgacctcaagggacgtatcccggcc
ggtgagcaggccacgtcagggcgtgcgctggggcggctttcggacatcggatggggcaac
cggctgcggccgatgctcgcctcgcaggcacccgacggccctgtgccggacgaggtggcg
aacgccgtggtgggtgtactggccgactgggccaaggggcccggcggctgggcgtcaggg
gcggcggacgcccccgcgcgtcccgtcggcgtggtcaccgtcgcctcacgcactcgcccg
gcactgatcgcgtctctgggcgcccgcatcgcggagatcggccggctgccactgctgggc
tcggtggactacgcggtcgactcgccgccggttccgcgaagcaacagcgcccaacgcctc
aaggcactcgacggggcgctgaccgttccgcccgcgctcgccgcggcgctggccgaggcc
gggggtcccgtgctgctcgtggacgacttcacggagaccggctggaccctcgctgtggtg
gcccgcatgctgcgtcgcgccggggcggaggaggtgcttccactggttctgggcatccag
ggttga
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