Streptomyces caniscabiei: IHE65_15685
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Entry
IHE65_15685 CDS
T08931
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
scae
Streptomyces caniscabiei
Brite
KEGG Orthology (KO) [BR:
scae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scae03400
]
IHE65_15685
DNA repair and recombination proteins [BR:
scae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
IHE65_15685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
AAA_34
SWI2_SNF2
Helicase_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
WEO24504
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Position
3583855..3585483
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AA seq
542 aa
AA seq
DB search
MTTWSPGMSFKALLADAPMAYIRAHLGEQLCALLDLIEGGTAGDDRLRAVAPIAIDAERL
VADAAERTALIALVPKPKQAELTQRLGSLGDEQEPLDYLQSLKWTADERRELLEFFGFTI
DRVPSLPPAFKQEAGPEYGLFPHQRQAAARVKELLYDGSRRTVLHLPTGVGKTRTGMSLI
CDHLRQHEPTVVVWLAHGQELLEQAAVEFERAWTKVGDRPVPVLRVWGNASADLADMTDG
LVVLGLEKAVSAAKSDPQFLATLAARSTLTVFDEAHQIIAPTFQRVVDELTIRHDASLLG
LTATPGRTWADISKDEELSDYFSRQKVMLEIEGYTNPVAALIDQGYLAKPLMRTVASEAG
MHLSARDQQLLARSFDIPAAMMAELARDEQWNLKIVQTITELLQQQHRRILVFAASVDHC
RLIAAVLSAAGFDAEFVTGESSPRHRSQVISRFKGSGRRPMVLCNFGVLTTGFDAPAASA
AVIARPTKSLVLYSQMVGRVIRGPKAGGTDTCEIVTVVNPELPGFGDVAEAFTNWEDVWE
TA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacctggtcaccagggatgtccttcaaggcactgctcgcggatgcgccgatggcg
tacatccgagcgcatctcggcgagcagctgtgcgctctgctcgacctgatcgagggaggc
acggcaggtgacgaccgccttcgggctgtcgcccccatcgccatcgacgccgagcgtctg
gtcgccgacgctgctgagcgtacggccctgattgccctggttccgaagcccaagcaggcg
gagttgactcagcgcctgggctcgctgggggacgagcaggagccgctggactacctgcag
agcctgaaatggacggccgacgagcgccgcgagctcctggagttcttcggcttcacgatc
gaccgggtgccatccctcccgccggcgttcaagcaggaggcggggccggagtacggcttg
ttcccgcatcagcgtcaagctgcagcacgggtcaaggaactgttgtacgacggctcacgg
cggacggtgctgcacctccccacgggtgtgggcaagacccgaacgggcatgagcctgatc
tgcgaccatctgcggcagcatgagcccactgtggtggtgtggctggcccacggtcaggaa
ctgctggagcaggccgccgtcgagttcgagcgcgcctggacgaaagtaggcgaccgaccg
gtccccgtcctgcgggtctggggcaacgcctcggcagaccttgcagacatgaccgacggg
ctggtcgtgctcggcctggagaaggccgtctcggcggccaagtcggatccgcagttcctg
gccactcttgcagcacgcagcacgctgacggtcttcgacgaggcccatcagatcatcgca
cccacgttccagcgagtagtcgatgaactgacgatccgtcacgatgcgagtctgctgggg
ctgaccgccaccccggggcgcacgtgggccgacatctccaaagatgaggagctctccgac
tacttctcccggcagaaggtcatgctggagatcgagggctacacgaacccggtcgcagcc
ttgatcgaccagggctacctggccaagccgctgatgcggacggttgcctccgaggccggc
atgcatctgtccgcccgggaccagcagctccttgcacggtccttcgatatcccggccgcc
atgatggccgaactcgcgcgcgacgagcagtggaacctcaagatcgtccagacgatcacg
gagctgctccagcaacagcaccggcgcatcctggtgttcgccgcctccgtggaccactgc
cggctaatcgcagcggtgctttccgctgcgggcttcgatgccgagttcgtgacgggcgag
tcctccccccggcaccgcagccaggtcatctcgcgattcaaggggtccggccgtcgcccc
atggtgctgtgcaacttcggtgtcctgacgactggcttcgacgcaccggccgccagcgcg
gcagtgatcgcccgcccgaccaagtccctggtgctgtacagccagatggtcggccgcgtc
atccgcggcccgaaggccggcggcacggacacctgcgaaatcgtcaccgtcgtaaacccg
gagcttcccgggttcggcgacgtggcagaagcattcaccaactgggaagacgtatgggag
acagcgtga
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