Streptomyces californicus: I6J39_29645
Help
Entry
I6J39_29645 CDS
T07611
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase family protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
scal
Streptomyces californicus
Pathway
scal00521
Streptomycin biosynthesis
scal00523
Polyketide sugar unit biosynthesis
scal00541
O-Antigen nucleotide sugar biosynthesis
scal01100
Metabolic pathways
scal01110
Biosynthesis of secondary metabolites
scal01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
scal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
I6J39_29645
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
I6J39_29645
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
I6J39_29645
Enzymes [BR:
scal01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
I6J39_29645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Cupin_1
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
QRV32320
LinkDB
All DBs
Position
complement(6803151..6803774)
Genome browser
AA seq
207 aa
AA seq
DB search
MTRGRVPGVVVLEPHHLTDERGVFYEGVRTDALTAVTGRPFAPRQVNYSVSRRGTLRGLH
GVRVPPGQAKLVTCVRGSVRDVVVDLRLGSPEFGTYETTALDAESGRAVYVPEGVVHGFL
ALTDDACVSYLLSTPHVPGTQIDIDPLDPDLAIAWTAGAPADLELLLSAKDRAAPGVREA
EAAGLLPYWRGSRHPAAPLPQRSGASG
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
gtgacccggggacgcgtccccggcgtcgtcgtactcgaaccgcaccacctcaccgacgag
cggggcgtgttctacgagggagtgcgcaccgacgccctcacggccgtgacgggccggccg
ttcgcgccccggcaggtcaactactcggtctcccgccggggcactctgcgcggtctgcac
ggcgtgagggtcccgccgggccaggcgaagctggtcacctgcgtgcgcgggtcggtgcgc
gacgtggtggtcgatctgcggctgggctcccccgagttcggcacgtacgagacgaccgcg
ctggacgcggagtcggggcgcgcggtgtacgtccccgagggcgtggtgcacgggttcctg
gccctcaccgacgacgcctgcgtcagctatctgctgtccaccccgcacgtgcccggtacc
cagatcgacatcgacccgctcgacccggacctcgccatcgcgtggacggccggggcgccc
gcggacctggagctgctgctgtcggcgaaggaccgggccgcccccggggtgcgggaggcc
gaggccgccggtctgctgccgtactggcggggctcgcggcacccggcggcgcccctgccc
cagcggtcgggggcttccgggtga
DBGET
integrated database retrieval system
