Struthio camelus australis (South African ostrich): 104142210
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Entry
104142210 CDS
T08512
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03013
Nucleocytoplasmic transport
scam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104142210 (UPF3B)
03015 mRNA surveillance pathway
104142210 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scam03019
]
104142210 (UPF3B)
Messenger RNA biogenesis [BR:
scam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104142210 (UPF3B)
mRNA cycle factors
P-body specific factors
104142210 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
104142210
NCBI-ProteinID:
XP_009670333
Ensembl:
ENSSCUG00000006315
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MVEKDPQNQRNVEAYVEGACQQVVIRRLPPSLTKEQLEELLQPLPEHDYFEFFANDSSLY
PHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAK
TGTIEDDPEYKKFLESYSADDEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRL
REEKREERRRRELERKRQREEERRKWKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKI
KLLKKPEKDEKDLEKKEKSKKLEKETLREEKNASSASAKRSDGETKEEKAKKSEDECVKD
YRDRDRDFERDREYERAQREKLRRQEEERRRQKERFEKEKVFRRKEEEVKKERDLLREKG
KKSDLTDFTSNTDKPEKVTKDDKKEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDN
AAKPTDQGADKKPESETSNTKEEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaaaggaccctcagaaccaaagaaatgtggaagcctacgtggagggagcttgt
caacaggtggtgatccggcggctgccgcccagcctcaccaaggagcagctggaggagctc
ctgcagccgctgcccgagcacgactacttcgagttcttcgccaacgactccagcttgtac
ccgcacatgttttcgagagcctatatcaactttaaaaaccaggaagacatagtcctcttc
agggatcgctttgacggctatgtttttgttgatcacaaaggtcaggaatatgctgccata
gtagagtttgcacctttccaaaaagctgcaaaaaagaagagtaagaaaaaggatgccaaa
actgggactattgaagatgatccggagtacaagaagtttctggaaagttacagtgcagat
gatgaaaaattaacctcaactcctgaaactttgctggaggaaatagaggcaagaaacaaa
gagctaatagctaaaaagactactcccttattgaacttcctgaaaaataaacagaggctg
agagaagaaaaaagagaggagaggaggaggagagaattggaaagaaaaagacaaagagaa
gaagaaagaagaaaatggaaagaggaggagagaaggaagagaaaagaagcggaaaaactg
aagaaggtagacagatgtccagaaaaagaaagggacagatcaaaagaagagccaaagatt
aagctacttaagaagcctgaaaaagatgaaaaagacttggagaaaaaagaaaaatccaag
aaactggaaaaagagactctaagggaggaaaaaaatgcgagtagtgcatctgccaaacga
tctgatggggagacaaaagaagagaaggcaaaaaagtcagaagatgagtgcgtaaaggac
tacagggaccgagatagagattttgaaagagacagagagtatgagagagcacagagggag
aaactgagacgccaggaagaggagcgtcggaggcagaaagagcgctttgagaaagagaag
gttttcagaagaaaagaggaagaggtgaaaaaggagagagacttgctcagagaaaaggga
aagaaaagtgatcttacagactttaccagcaacacagacaaacctgagaaagtaaccaaa
gacgataaaaaagaggatacaattaagagggatcgtatcagaaacaaggatcgtccagca
atgcagctgtaccagccaggagcccgaagccgaagccgactctgtcagtatgaagacaat
gctgcaaagcccacagatcagggagcagataagaaaccagagagtgagaccagtaatacg
aaggaagaggagtga
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