Struthio camelus australis (South African ostrich): 104146930
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Entry
104146930 CDS
T08512
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
scam
Struthio camelus australis (South African ostrich)
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scam03036
]
104146930 (CHD6)
Chromosome and associated proteins [BR:
scam03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104146930 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HDA2-3
MUN
BRK
Motif
Other DBs
NCBI-GeneID:
104146930
NCBI-ProteinID:
XP_009677529
Ensembl:
ENSSCUG00000011432
LinkDB
All DBs
Position
Unknown
AA seq
2724 aa
AA seq
DB search
MLVHMQLARREITFIPDLMIMKIQKKEKQPPSLKVLSRSPMSDASDAWECKAQDHFASDE
KEDEVPHQVTATDVDSQCQCPEEEPDGAPQKRTAAQNGMQDSGGGGTGVKKKRKKKELGE
QEGGEKAAVEKEVKPKRRREPKEPKEPKKVKEPKKPKEPKQKEVAKKPRKPREPKTPKEP
KDKKSSSEPSPRARPKKSSKEQGPTPVERKKKGKRKNEIPVESLELDQDLLSPSVQSPEE
SAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEP
PEDDANIIEKILASRMVQKEAHPGGLAYEMEEFYVKYRNFSYLHCKWATLEELEKDPRIS
QKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSL
PYEESTWELEEDVDPGKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSNQLREYQ
LEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWE
REFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCP
ELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLE
PQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTN
IQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKA
HSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYT
YERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQN
DLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQ
QLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKAS
FVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDEL
MEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHL
NEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRK
GKKTKNQMLLPEIKNADWLATCNPEIVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLG
EAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPA
LCFLEKVGMPDEKLLSAEQGVSDGAQDATERGSMEKEENGGEKLEGLPKQEDIVAAGVGE
ASEKQDEPVAAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPGNHG
YWLQDEMFRRASELDSANKEMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAIS
RLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGSPDPDIYVEPITEERAARTLYRIELL
RKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYFIMNDPQ
LSFLDAYRNYAQHKRTGIPGPETLCCLYQTNSKLYSSPLYSQVDRPCESLENEAESQIKL
ENIDNTMSQAGGSPLDASCETFMSKVRDIISSNYDESSLPDSLMCMMYDEKACNSEQSSL
ARDSPSCTDVGNSVAKLSESKLEGDEDPSNCDAEVMRETSFLESLQVDCERIDGQNEEAE
PSPSTPESDPSRSVPAELCEALQQKGNLTSRGAVLPEHSSMEGVISVGLYSPSLHNYEIK
VPPEQRFINLLQEKGMEAKSGPSQSHSEEDEEEEEEDDNSETAADVVEDLSGPRTRAICD
PGANELRGEEQSSGLPTPEEDTCPEDANGERESLGPGILEGPGEPGPGGREDHDPDEESA
SQHSPGQPQSQAFSLPAPPLGPLEAEHPRAGGEAWDQGAEGQAGCREALHPEPQGAKQEQ
CENRDEEEKAGSGQSQDGTEKYLEEESKSSTSVLPGEIDDLQDARAPTIAQLLQEKTLYS
FSEWPKDRVIINRIDNICHAILKGKWPSSSQQFETQSLMTTSAVASSAGSRNSFAESEAP
DPNFNNGVLISQVQKDGFLAPAFVKDERKHRRPYEFELERDSKQRSLEHLAATHAHPPIV
LNGWRDSAVDLSRASDGSPGNSSPFPLNTNMPKLGTVNTLQGSLGMDLSGILQAGLIHPV
TGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLIFLKERPLPSRLQDVQEDQTQPPQNSPLP
DGPVAATSTPQPVPAAVSQAEKAVPNKSLLDWLRQQSDYTLDVPSFGTNFSDKPKQRRQR
CKDPSKLDVNSLTGEERVPVVHKGTGRRGYLPENKFNRILTEPVLRDAGPRRRGRRPRSE
LIKAPGVIADSSSGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPAGE
DVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPMTTTCTATAPTSLTSTTKSGTSNTEKAT
EDKQSSQDVKKETLSEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLS
PGIGMALPGIQQTRHCEAANLESQKRKRKKAKGESANPEPETVLLSEKEAASSQNCTEQT
PPLSTEKQQDVPAEEELKEVNDTN
NT seq
8175 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttcatatgcagctggcaaggagggaaataacattcatcccagatttgatgata
atgaaaatacagaaaaaagaaaagcagccaccgagcttgaaagtgctgagccgctcacca
atgtcggatgcctcggatgcctgggagtgcaaggcacaggaccactttgccagcgatgag
aaggaggatgaggtgccccatcaggtgacggccacggacgtggacagtcagtgccagtgc
ccggaagaggagcctgatggggctccccagaagcggacagcagcccagaacgggatgcag
gacagtgggggtgggggcacaggggtgaagaagaaacggaagaaaaaggagctgggagaa
caggaagggggagaaaaagcagctgtggagaaggaggtaaaaccaaagaggaggagagag
cctaaagaaccaaaagagcctaaaaaggtcaaggagcccaagaagccgaaagagcccaag
cagaaggaggtggccaaaaagccccggaaaccccgggaaccgaaaacccccaaggagcct
aaagacaagaagagcagctctgagccttcccccagagcaagacccaagaaaagcagcaag
gagcaggggcccacacccgtggagaggaagaagaaagggaagaggaaaaatgagatcccg
gtggagagtttggagttggatcaagatctcctgagcccgtctgtgcagagcccggaggag
tctgctgagtcggctgacagccagaaacgccgctcaggacgccaggtaaagaggaggaag
tacaacgaggacctggatttcaaggtggtagatgatgatggcgaaacaatagctgtgctg
ggagctgggcgaacttctgcgctctccgcctccactctggcatggcaggcagaggagcct
cccgaggatgatgccaatatcattgagaagatccttgcctccaggatggtgcagaaggag
gctcaccccggaggcctagcgtatgagatggaggagttctacgtcaagtacaggaacttc
tcctaccttcactgtaagtgggcaactctggaggagctggagaaggaccccaggatctct
cagaagataaagcgtttccggaacaagcaagctcagatgaagcatatttttacagagcct
gatgaggatttgttcaacccagactatgtggaggtggatcgaatcctggaggtggctcac
acaaaggaccctgacaccggagaggaggtgactcactacctggtgaagtggtgctctctg
ccctacgaggagagcacctgggagctggaggaggatgtcgacccagggaagattaaagag
tttgaagccctccaaatccctccagaaatcaagcacatggagcgcccggcatctgagtct
tggcagaaactggagaagtcccgggaatataagaacagtaatcagctgcgggagtatcag
ctggagggaatgaactggctgctttttaactggtataacaggaagaactgcatcctggct
gatgagatggggctggggaagacaatccagtcaatcaccttcctctcagaaatcttccta
atgggcattcatggccccttcctcatcattgcacccctctccaccatcaccaattgggag
agggagttccgcacctggacggagatgaatgcaatcgtgtaccacggcagccagatcagc
cggcagatgatccagcagtatgagatggtgtacagggacacacagggtaaccctctcccc
gggatcttcaagttccaggtggttatcaccacctttgagatgatccttgccgattgccca
gagctgaagaagatccagtggcgctgtgtggtcattgatgaggcacatcgcctgaagaac
aggaactgcaagctgctggaggggctgaagctcatggccctggagcataaggtgctgctg
acagggacccccctgcagaactccgtggaggagctcttcagcctcctgaatttcctggag
ccacagcagttcccatcagagacggccttcctggaggagtttggggacctgaagacagag
gaacaggtgaagaagctgcagtccatcctgaagcccatgatgctgcgacgtttgaaggat
gatgtggagaagaatctggcacccaagcaggagaccatcattgaggtggagctgaccaat
atacagaagaaatactacagggctattctggagaagaacttctccttcctgtccaagggc
gccaaccagcacaatatgcccaacctcatcaacaccatgatggagctgcggaagtgttgc
aatcacccatatctcatcaatggagcagaggagaagatcctggaagacttccgtaaagcg
cacagcccagaggcaccagacttccagcttcaggcaatgatccaggcagccgggaagctg
gtgctaattgataaactgcttcccaagctgatagcaggtgggcacaaggtgctcatcttc
tcccagatggtgcgctgcctggacatcctggaagactatctcattcagaggcgatacacc
tatgagcgaattgatgggcgagtgcgcgggaacctgcgccaagccgccattgaccgcttt
tgcaagcccgattcggatcgctttgtctttctcctctgcacccgggcgggtgggctgggc
atcaaccttaccgctgccgacacctgcatcatctttgattcagactggaacccacagaat
gacctccaggctcaagctcgctgccaccggatcgggcagagcaaggcagtgaaagtctat
cgcctcatcaccaggaattcctatgagcgtgaaatgtttgacaaggccagtctgaagctg
ggcctggataaggctgtgctgcaggacatcaaccgcaagggcagcaccaacggggttcag
cagctctcaaagatggaggtggaggacctgctgcggaagggtgcctacggcgctcttatg
gacgaggaggacgaaggatccaagttctgtgaggaagacattgatcagatcctccagcgc
agaacacagaccatcacgatccagtctgaggggaaggggtccacctttgctaaggccagc
tttgtagcatcaggaaacagaactgacatttccttagatgaccccaacttctggcagaag
tgggcgaagatagcagagcttgacacagatgccaagaacgaaaaggagagcttagtcatt
gacaggcccagggtgcggaagcaaaccaaacactacaactcctttgaggaggacgagctg
atggagttctccgagctggacagtgattccgacgagcggcccacacgctcgcggcgcttc
aacgagaagacacggcggtacctgcgggctgagtgcttccgtgtggagaaaaacctgctc
atatttggctggggacgctggaaagatatcctgacccacggccggttcaagtggcatctg
aatgagaaggacatggagatgatttgtcgggccttgttggtctattgcgtcaaacactac
aaaggggatgagaagattaagagttttatctgggatctcatcacgccgacaaaggatggc
cagaaccaagctctgcagaatcactcaggtttgtcagcaccggtgcccaggggcaggaag
gggaagaagacaaagaaccagatgctgctcccagagataaagaacgcggactggcttgct
acatgcaaccctgagatagtcctgcatgatgacagctacaagaagcacctcaaacagcac
tgcaacaaggttctgctgcgcgtgcgaatgctctactacctgaaggctgaagtgctgggg
gaggccgctgacaaagccttcgaggggacccctgccagagagctggatgtgctgctgcca
gacatcgactatgtggagatcccagtggactggtggaatgctgaagctgataaatccctt
ctcatcggtgttttcaaacatggttatgagaggtacaacgccatgcgggcagacccagcg
ctgtgcttcctggagaaggtgggcatgccagatgagaagctgctgtctgcagagcagggt
gtcagtgatggggcccaggacgctactgaaagggggagcatggaaaaggaggagaacggt
ggagaaaaactggaggggctgccgaagcaggaggacatcgtggctgctggggtgggtgaa
gccagtgagaagcaggatgagccagtggcagcccaggatggctccgactcagacagatcc
tgctggcctgtctcatctgccctcacagccagactgcggaggcttgtcaccgtctaccag
cgctgcaaccgcaaagagctgcctccccgtgccgagatgctggtgcccggtaaccatgga
tactggctgcaggacgagatgttcaggagagcctctgagctggactcagcaaacaaagaa
atgcagaaaaggtggaccaggagggaacaggcagatttctaccgcactgtctcctccttt
ggggtcatctatgaccaggagaagaagatctttgattgggcccagttccgagccatctct
cgattggagaagaagacagatgagagcctagaaaagtacttctacagctttgtggccatg
tgcaagaatgtctgcggtctgccactgtggaaggaggatggttccccagatcctgacatc
tacgtggagcccatcaccgaggaacgtgctgccagaaccctgtaccgtatcgagcttcta
cggaaggtgcgcgagcaggtgctcaagtgtccacagctccacgagcgactcaagctgtgc
cggccaagcctctatctgccggtgtggtgggagtgcggcaaacatgatcgggacttgcta
attggcaccgctaagcatggtctgaatcgcaccgactacttcatcatgaatgacccacag
ctgtcttttttagatgcatacaggaactatgcccagcataaaagaacagggatcccaggt
ccagaaaccctgtgctgcctttaccagactaactccaaactctacagttcccctctgtat
agccaggtggaccggccttgcgaatccctggagaatgaagctgagagtcagatcaagcta
gaaaacatagacaacaccatgtcccaagctgggggcagtccactggatgcaagctgtgaa
acattcatgtctaaagtccgggacatcatttccagtaactacgatgagagctctctccca
gactcgttgatgtgtatgatgtacgacgaaaaggcctgtaacagtgagcaaagctccctt
gcccgagacagcccaagttgcacagatgttggaaacagtgttgctaaactctctgagagc
aaactagagggggacgaggatccatccaactgtgatgcagaggtcatgagagagacttcc
ttcttagagagtttgcaggtggactgtgaacgaatagacggtcagaatgaagaagctgag
ccttcaccttctaccccagaaagtgacccctcaaggagtgtcccagcagagctctgtgaa
gccttgcagcagaagggaaacctcaccagccgtggggcagtgctgcctgaacacagtagc
atggaaggtgtcatcagcgtggggctgtacagtcccagtcttcataactatgaaataaag
gttcccccagaacagaggttcattaatttgctgcaggagaaaggcatggaagcaaaatca
gggccgagtcagagccacagcgaggaagatgaggaggaggaggaagaggatgataactct
gagacagcagcagatgtcgtggaggacttgagtggtccaaggaccagggccatttgtgat
cccggggctaatgaactgagaggcgaggagcagagctctggcctccccacacctgaggag
gacacttgcccagaagatgcgaatggcgagagagagtccctggggccagggatacttgag
gggcctggggagcctggtcccgggggcagggaggaccatgatccagatgaggagagcgcc
tcgcagcactcaccaggccagcctcagagccaggccttcagcctgcctgcacctccactg
gggcccctggaagcagagcacccccgtgctgggggggaagcctgggaccaaggggctgag
gggcaggcaggctgcagagaggccctgcaccctgagccccagggagcgaagcaagaacaa
tgtgagaacagagatgaggaggagaaagccggcagtggccagagtcaagatggtacagag
aaatatctggaggaagagagcaagagttctacatctgtcctgcctggggagatcgatgac
cttcaggatgctcgggcaccaaccatagcccagctgctgcaggagaagacactttactcc
ttctctgagtggcctaaggaccgtgtgatcatcaaccgcattgacaacatctgccatgcc
attctgaagggcaagtggccttcttctagccagcagtttgagacgcaaagcctgatgacc
acctcagcagttgccagcagtgccggcagtaggaacagctttgctgagtcagaagctccg
gatcccaactttaacaatggagtgttaatctcacaggtacaaaaggacggtttcctggcc
cctgcctttgtgaaggatgaacggaagcacaggaggccgtatgaattcgagctggagaga
gattccaaacagaggagcttggagcatttagcagcaacccatgctcatccaccgattgtg
ctgaatggctggcgtgactcagctgtggacctgtccagagcctctgatgggtccccagga
aattcctccccttttcccttgaacacaaacatgcccaagctggggactgtgaacaccctc
cagggctccctgggcatggacttgtctggcatccttcaggcagggttgatccatcctgtc
actggacagattgtcaatggcagcctccgaagagatgatgctgccatgaggagaagacgg
ggcagaagaaaaaatgtagaagggatggacctcatcttcttgaaggagaggccgcttcca
agtaggctacaggatgttcaggaggaccagactcagcctccccagaacagtcccctccca
gatgggccggttgctgctacctcaactccacagccagtcccagctgcggtcagccaagca
gagaaggctgtcccgaataagagtctcctagactggctccgtcagcaatccgactacaca
ctcgacgttcccagctttggcacaaatttttcagacaagcccaaacagaggaggcaacgc
tgcaaggaccccagcaaattggacgttaactcactcacaggagaggagcgtgtgcctgtg
gtacataagggtaccggacggaggggatacttaccagaaaataaattcaatcgtatcctc
actgagcctgtgctccgagatgcagggccccgtcggagggggagaaggcccagaagtgaa
ctcattaaagcccctggtgttatagcagattcttcttctggtatgggaccattattcatg
aatggactgattgctggaatggatctagtaggacttcagaacatgagaaacatgcaaggt
atccctctaacggggctggttgggtttcctgctggatttgcagcagtgcctgctggtgag
gatgtgaaaagcaccctaagtatgttgcctatgatgctgccaggcatggctaccgtacca
cagatgtttggtgttggaggacttctcaacccaccaatgacaactacttgtactgcaact
gctccaacttcattaacaagcacaactaaaagtggtacatcaaatacagaaaaagctact
gaggataaacagagtagccaggatgtgaaaaaagaaactctctctgaagacaagcctggt
cctagttcgttttctaatcagacagaatctgcaataactaccagtagtcctgtagctttt
aacccgtttcttatcccaggaatgtcacctggactgatctatccatcaatgtttctttcc
cctggcattggcatggcattgccaggcatacagcaaaccagacattgtgaggcagcaaac
ctagaaagccagaagcgtaagagaaagaaagctaaaggggaatcagcaaatccggaacca
gaaactgtcttgctgtctgaaaaggaagctgcaagcagtcaaaactgtacagagcaaaca
ccacctttgtcaacagagaaacagcaggatgtaccagcagaggaggagttaaaagaagtt
aatgataccaattag
DBGET
integrated database retrieval system
