Struthio camelus australis (South African ostrich): 104148451
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Entry
104148451 CDS
T08512
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
scam
Struthio camelus australis (South African ostrich)
Pathway
scam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104148451 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scam03041
]
104148451 (DDX46)
Enzymes [BR:
scam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104148451 (DDX46)
Spliceosome [BR:
scam03041
]
Complex A
U2 snRNP components
U2 related factors
104148451 (DDX46)
Complex B
104148451 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104148451
NCBI-ProteinID:
XP_009679945
Ensembl:
ENSSCUG00000015957
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MNLQYRHYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRDRKRQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSPSPSKNKKTENRSRSK
EKTEGVEVSKEKKKEKDDKEEEKDKDASTCTVTTENFDQNKLEEEMRKRKERVEKWREEQ
RKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGSEVEDEELDPLDAYMEE
VKEEVKKFNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAAESEKKKGELMENDQDAMEY
SSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYR
LELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIG
IAKTGSGKTIAFLLPMFRHIMDQRQLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGL
RVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRM
FDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVE
QHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGID
QYDRDSIINDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAG
NKGYAYTFITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKIIKKSSGFS
GKGFKFDETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPG
TSNVPTPSAGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTI
QAPTVSAKTIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTAR
WKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEIT
RLIKEELIRLQNSYQPTNKGRYKVL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaatacaggcattatcggaagcgctctgcatcacgtggacgctctggtagc
cgttctagaagtcgttctccgtctgacaaaagaggaaaacgtggagaagacagacgctct
agaagcagagatcgagaacgtaggcgtgagaggtcacgcagcagggacaagaggaggtct
cgatcgcgtgacaggaagcgtcaaagacgttcaagaagtagagaaagggaacggagcagg
gagagaagaagatcccggagccgagagagaagacgttctaggagcagaagtagaggtaga
cggtctcgatcccctagtccaagcaagaacaagaaaacagaaaacagatcaagatctaaa
gagaagactgaaggtgtggaagtttctaaagaaaagaaaaaagagaaagatgataaagaa
gaagaaaaggataaagatgctagcacgtgtaccgtgaccactgagaactttgatcagaac
aaactagaagaagaaatgagaaaacgaaaagaaagagtggaaaagtggagggaagaacaa
cgcaagaaagctatggaaaacataggagaactgaaaaaggaaattgaagagatgaaacag
gggaaaaaatggagtttagaagatgatgatgatgatgaagaggaaactgcagaaggagag
aaagaaggcagtgaagttgaagatgaagaattagatcctttggatgcttatatggaagaa
gttaaggaagaggtcaagaagttcaatatgagaagtgtgaaaggtggaggtggaagtgaa
aagaaatctggaccaactgttaccaaagtagtaactgtggtgacaaccaaaaaggcagct
gcagaatcagaaaagaagaaaggagagctcatggagaatgaccaagatgcaatggagtat
tcctcagaagaggaggaagttgatcttcagactgccctgactggctatcaaaccaagcag
agaaagctgctagaaccagtggatcatggaaagatagaatacgagcccttcaggaaaaac
ttctatgttgaagtaccagagctagctaaaatgactcaagaagaggtgaatgtgtacaga
ctggaattggagggaattacagtcaagggaaagggctgccccaaaccaataaaaacttgg
gtgcaatgcggtatttccatgaagattctcactgcgctcaaaaaacatggctatgaaaag
cccactcccattcaaacgcaggctatccccgcaattatgaatggacgtgatttgattggt
attgctaaaacaggaagtggaaaaactattgcgtttcttttgcccatgtttagacacatt
atggatcagaggcaattagaagaaggagaaggtcctatagctgtcattatgacacctact
cgagagttggctttgcagattaccaaggagtgtaagaaattctcaaagacacttgggctt
cgagttgtctgtgtgtatggaggaacaggaatcagtgaacagatagctgaactcaaaaga
ggtgctgaaattattgtttgcacacctggacgtatgattgacatgttagcagctaacaat
ggtcgggtgacaaatctccgtagagtcacttatgttgtacttgatgaagcagacagaatg
tttgacatgggttttgagcctcaggtcatgcgcattgtagacaacgtcaggcctgatcgt
cagactgtcatgttctctgctacttttcccagagctatggaggcattagctcggaggatc
ctaagtaaacctatagaagtgcaggttggaggcagaagcgttgtctgttctgatgtggag
caacatgttattgtcatagaagaggagaacaagtttttgaagttacttgagctgctggga
cactatcaggagaaaggatccgttatcatatttgtcgataaacaagaacatgctgatggt
ctgttgaaagatttaatgagagcttcttatccctgcttgtctcttcatggaggtattgat
cagtatgacagggacagcataattaatgatttcaaaaacggaatttgcaaacttctggtg
gccacatctgtagcagcaaggggcttggatgtaaaacagttaatgctggtggtcaattac
agttgtcccaaccattacgaggattatgtgcacagagcaggccgaactggacgagctggc
aataaaggatatgcatatacattcattactgaggatcaagcacggtatgctggtgatatc
attaaggctttggagttgtccgggaacccaattcctactgatttggagaagctctgggct
gacttcaaagaccagcagaaggctgaaggaaagattattaaaaaaagcagtggattctct
ggcaaaggttttaaatttgatgaaacagaacaggctttggctaatgaaagaaagaaacta
caaaaagcagctcttggcttgcaagattcagatgatgaagatacagctgttgatattgat
gaacaaattgaaagtatgttcaattcaaagaaaagagtaaaagacatggcagcaccaggc
acatcgaatgttcctacaccgtcagccggtaatgcagaaaaattggaaattgctaaaaga
ttggctttgagaatcaatgctcagaagaatcttggagcagaggcacaagtattggtccct
ttccacttcaaggatgtgatgcagcaggctacaaatgcgatcttgagaggaggcacaatt
caagctcctactgtatctgccaagaccattgcagagcaactggctgaaaaaatcaatgct
aagctcaattatgtacccatagaaaagcaggaggaagagaaacaggatggaggacaaaat
gaatcttttaagagatatgaagaagaattagagatcaatgacttcccacagactgccaga
tggaaagttacgtccaaagaagctctgcagagaatcagtgaatattctgaagctgctatt
acaatcagaggaacttatttccctcctggcaaagaacccaaggaaggagaacgaaagatt
tatttggctatagagagtgccaatgaactggctgtacagaaagcaaaggcagaaatcacg
cgacttataaaagaggagcttatcagactgcaaaattcataccaaccaaccaacaaagga
agatacaaagttctataa
DBGET
integrated database retrieval system
