Serinus canaria (common canary): 103818812
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Entry
103818812 CDS
T05755
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103818812 (DDX27)
03009 Ribosome biogenesis [BR:
scan03009
]
103818812 (DDX27)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103818812 (DDX27)
Spliceosome [BR:
scan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103818812 (DDX27)
Ribosome biogenesis [BR:
scan03009
]
Eukaryotic type
Pre-60S particles
Helicases
103818812 (DDX27)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
FerA
AAA_22
PRK
Motif
Other DBs
NCBI-GeneID:
103818812
NCBI-ProteinID:
XP_009091458
UniProt:
A0A8C9NHC6
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MATLESLGLVGTIAEGDVVPVDSESGDSEDEEELPRAPGPRRRGPSRGDFSADFVFGEAE
AGGEDAWTAALRQLRGKKAATTLDEKIEKVRQKRKLQEREAKQAKVKDEDAEVEDDQTKK
EREDCCRDEEDVESEYSLDDESIFTKADKVKVKEKKRSKKGEVEAESFFEDASQYDDNLS
FQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER
LIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSG
PDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSHHRQTM
LFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVTALLT
RTFQDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQTQRLESLRRFKDEQIDILVA
TDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEIV
KTAKTQVKARILPQDVILKFREKIENLEKDIYAVLCLEREEREMQQSEAQINKAKKQLET
GKKETGSESLERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFVQDTQKKGQMTPEE
RSQFEILKSQMYAERLAKRNRRAKRARALPEEEPAAAPAGPKKKKKLSVFDEELTNTSRK
ALKQYRAGPSFEDRKRLGIAQRRKGGNFKSKSRYKRK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctggagagcctgggcctggtgggcaccatcgccgagggggacgtggtgccc
gtggactctgaatccggcgactccgaggatgaggaggagctgccccgggcgccgggcccc
aggcggcggggaccctcccgcggcgacttcagcgccgacttcgtgttcggggaggcggag
gccggcggggaggatgcctggacggcggcgctgcggcagctccgcggcaagaaagcagct
acgacgctggatgagaagattgagaaagtgagacaaaaaaggaagctccaggaaagggaa
gctaaacaagccaaagtgaaagatgaggatgcagaggttgaagatgatcaaaccaaaaag
gagcgtgaggattgctgtagggatgaagaagatgtggagtctgagtattcactggatgat
gaaagtatcttcacaaaagcagataaggtcaaagtgaaggaaaagaagagatcaaaaaag
ggagaagtggaagcagagagcttttttgaagatgcctctcagtatgatgataacttgtcg
ttccaggacatgaatctttcacgacctttgctgaaggcaatcacagctcttggcttcaag
caaccaaccccaattcagaaggcttgtatcccagtgggtcttctgggaaaggatatttgt
gcttgtgctgccactgggacaggtaaaacagctgccttcatcttgcctgtccttgagcgc
ctgatttacaaacctcgtcaggctccaataacacgtgtactggttctggtgccaacacga
gagctgggtattcaggtgcactctgtcacaaaacagctggcacagttcagcagtgtcaca
acttgcctggcagtaggtggcctggatgtgaagactcaggaagctgctctgcgctcaggg
ccagacattcttattgccactcctgggcgtctgattgatcatctccacaactgcccttct
ttccacctgagcagtgttgaggtgctgattttggatgaagcagacaggatgctggatgaa
tactttgaggaacagatgaaggaaattatcaggttgtgttcccaccatcgtcagacaatg
cttttctctgccacaatgactgaggaggtgaaagatttggcttctgtttccctgaaaaac
cccgtccggatttttgtgaacagcaacacagatgttgcacctttcctgcggcaggaattt
atccgcatcagacccaaccgggagggggaccgggaggccattgttacagctctgctgaca
cgaaccttccaggatcacgtgatgcttttcacccagaccaagaagcaagctcaccgcatg
cacatcctgctgggactgatgggcctgcgggttggggagcttcatgggaacctctctcag
acacagcgtctggaatcactcagacgctttaaggatgagcagatcgatatcctggtagct
acagatgtggctgcacgtggacttgatattgaaggtgttaaaacagtgatcaatttcacc
atgcctaacaccatcaaacactatgtgcaccgagtgggtcggacagccagggcaggcaag
gctggtcgttcagtttcactggtgggtgaggaagagcgtaagatgctgaaggagattgtc
aagactgctaaaacacaagtgaaagccagaatcctcccccaagatgtcatattgaaattt
cgggagaagattgagaatctagagaaagatatctatgcagttctctgcttggagcgtgag
gaacgtgagatgcagcagtcagaggcccagatcaacaaggcaaagaagcagctggagaca
ggaaaaaaagagactggaagtgagagtttggagcggagctggttccagacccgtgaggag
aggaagaaagagaaattggctaaagccctgcaggaatttgacctagcattacgagggaaa
aagaaaaggaagaaatttgtacaggacacacagaaaaaaggccaaatgacaccagaggaa
agatcacagtttgagatcttgaaatctcaaatgtatgctgagcggctggctaagaggaat
cgccgagcaaagagagccagagccttgccagaagaggaaccagcagcagcaccagcaggt
cccaagaagaagaaaaagttgtctgtgtttgatgaagagctgaccaacacgagcaggaag
gctctgaagcagtaccgtgccggcccatcctttgaagatcgaaaacgcttgggtatcgcc
cagcgcaggaaaggagggaacttcaaatccaagtccaggtataagagaaagtaa
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