Serinus canaria (common canary): 103820501
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Entry
103820501 CDS
T05755
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X2
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scan03000
]
103820501 (SOX5)
Transcription factors [BR:
scan03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
103820501 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
103820501
NCBI-ProteinID:
XP_009093427
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVGEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQENCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPLKAEEGGRQG
GESLSGAALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAASPGLGPLQLQQLYAAQLAAMQVSPGGKIPGI
AQGSLGAAVSPTSIHTDKSTTSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
RINSGASSLKSSVPATLASPSARANTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK
VAVVNSLGLNNCRTEKDKTTLETLTQQLAVKQSEDGKFSHAMMDFNMSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQLPLATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGLPALPGAYGPKGDEP
LVKEELQPDEANGDVYDDYDEEEEDPDADYGSDSENHMAGQAN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggga
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaggagaactgtggccat
aggactcccacttcccagcacaacacaatggaagttgatggcaataaagtgatgtcttcg
tttgccccgcacaactcatctacctcacccctgaaggcagaagaaggtgggcgccagggc
ggggagtccctgtccggcgcggcgctgggcacccccgagcggcgcaagggcagcctggca
gatgtcgtggacaccctcaagcaaaggaaaatggaagagctcatcaaaaacgagccagaa
gaaactcccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgccatg
ggatcagggaactttggagaaataaaagggactccagaaagcctggctgagaaggagagg
cagctcatgggcatgatcaaccagctgaccagcctgagggagcagctgctggcagcccac
gacgagcagaagaagctggcagcgtctcagatcgagaagcagcggcagcagatggagctg
gccaagcagcagcaggagcagattgcgagacagcagcagcaacttctgcagcagcagcac
aaaattaaccttcttcagcagcagatccaggtccagggtcagctgcctcctctgatgatc
cccgtgttccccccagaccagcgaaccctagcagcagctgcccagcaaggattcctcctt
cctcctggcttcagctacaaggcgggctgcagtgacccctaccccgttcagctgatccca
actaccatggcagctgctgccgcagcatcgccgggcttaggccctctccagctgcagcag
ttgtatgctgcccagctggctgccatgcaggtgtctcctggaggcaagatccctggcatt
gcccaggggagccttggtgctgccgtgtcccccaccagcatccacacagacaagagcaca
accagccctcctcccaagagcaaggatgaagtggcccagcctctgaacctttcagccaaa
cccaagacatctgatggcaaatctcccacgtcccccacctctcctcacatgccagctctg
agaataaacagtggggccagttcactaaagtcctctgtgccagcaacactagcgagtcct
tcagccagagccaacacaataggttatctaaatgaccacgatgctgtcaccaaggccatc
caggaggcccggcagatgaaggagcagctacggagggagcagcaggtgctggatgggaag
gtggccgtggtcaacagcctgggtctcaataactgcaggacagaaaaagacaaaacaaca
ctggagaccctgacccagcagctggcagtaaagcagagtgaagatgggaagttcagccac
gcaatgatggatttcaacatgagtggagattctgatgggagcgcgggggtctcggagtcg
cggatctaccgggagtcgcgcgggcgcggcagcaacgagccgcacatcaagcgccccatg
aacgccttcatggtgtgggccaaggacgagcgcaggaagatcctgcaggccttccccgac
atgcacaactccaacatcagcaagatcctaggatctcgctggaaagctatgaccaaccta
gagaagcagccatactacgaggagcaggcccggctgagcaagcagcacctggagaagtac
ccagactacaagtacaagccccggcccaagcgcacgtgcctggtggacggcaagaagctg
cgcatcggcgagtacaaggccatcatgcgcaaccggcgccaggagatgaggcagtacttc
aacgtcgggcaacaggcgcagctgccgctggccacggcgggcgtggtgtacccgggagcc
atcgccatggcgggcatgccctcgccccacctgccctcggagcactcgagcgtgtccagc
agccccgagcccggcctgcccgcgctgcccggcgcctacgggcccaagggcgacgagccg
ctcgtcaaggaggagctgcagcccgacgaggccaacggcgacgtctacgacgactacgac
gaggaggaggaggaccccgatgcagactatggcagtgacagtgaaaaccacatggcgggc
caggccaactga
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