Serinus canaria (common canary): 103821583
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Entry
103821583 CDS
T05755
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103821583 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scan03041
]
103821583 (DHX8)
Enzymes [BR:
scan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103821583 (DHX8)
Spliceosome [BR:
scan03041
]
Complex C
Other components
Step II factors
103821583 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
PhoH
TsaE
Transformer
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103821583
NCBI-ProteinID:
XP_009094739
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MAELAAAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAILLK
NGAEFTDSLISNLLRLIQTMRPPPKPSTSKEAVVKPKSEKEKLRELYPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADKQSKQRGSDHRVKKRKRSRSRSRDRKRRHRSRSRS
RSRTWDRNRGKSRYRSRSRSWSPSKERKDREKYLEKSHERWRDKHIDRPPAEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGEPNEESSMRNPDRPSHLSLVSAPEVEDDSLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggcggcggcggaggagctcgctaagctcgagtacctgtcgctggtgtcc
aaggtgtgcaccgagctcgacaaccacctgggcatcaacgacaaggacctggccgagttt
gtgataagccttgccgagaaaaataccacgtttgacacgtttaaagcaattcttctgaag
aatggtgctgagttcactgattccctcatcagtaacctgctgcgtctcatccagacaatg
cggcctccaccaaaaccatccacgagcaaagaggcagttgtcaaacccaaatcagagaaa
gaaaagttgagggaattgtatccagccctttgcaggccagacaatcccaacatcaggaac
atgctggatgaagatgatgtgaaggtggcagctgatgccctgaaggagctcgaagctctg
atgcccagtgcagacaagcagagcaagcagaggggcagcgaccatagggtgaagaaaagg
aagaggagccgaagccgtagcagggacaggaaacggaggcacagatctcgctccaggtct
cgttccaggacttgggacaggaacaggggaaaatccagatacaggtcaaggagcaggagc
tggagccccagtaaggagcgcaaggatcgggagaaataccttgagaagagccatgagagg
tggagagacaagcacatagaccgaccaccagctgaggagccttccattggggacatctac
aatggcaaagtcaccagcataatgcagtttgggtgctttgtgcagctggaaggactgagg
aaacgttgggagggcttggtccacatctcagagctgcgaagagaaggacgggttgccaat
gttgctgatgttgtgagcaaaggacaaagagtgaaagtcaaagtgttatcttttactggg
tccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacctgaaccca
aaccgtaggaggaacctggttggagaacccaacgaggaaagctccatgaggaacccagac
agacccagtcacctgtccctggtgagcgcccccgaggtggaggacgacagcctggagcgg
aaacgcctcacccgcatttctgacccggagaagtgggagataaaacagatgattgcagct
aatgtgctttccaaggaagagtttcctgactttgatgaggagactgggattcttcctaaa
gttgatgatgaagaagatgaggatcttgagattgagctggttgaagaagagccaccattt
cttcgaggtcacactaaacagagcatggatatgagtcccattaaaatagtaaagaatcca
gatggttccctgtcccaggctgccatgatgcaaagtgctttagctaaggagaggcgagag
cttaaacaagcccagagagaagcagagatggattccatccccatgggcctcaacacacac
tgggtggatcctctccctgatgtggatggaagacaaatagctgccaacatgcgaggtatt
gggatgatgccaaatgatatcccagagtggaagaaacatgcatttggtggcaacaaagct
tcttatggtaagaagacccagctctccatcattgaacagagagagagcctcccaatcttc
agactgaaggagcagctgatacaagctgtgcatgacaaccagattctgattgttattgga
gagacaggatctgggaaaacaacccagattacccagtacctggctgaggcaggatatacc
tcaagagggaagattggatgtactcagcctcgcagggtggctgcaatgtctgttgcaaag
agggtgtcagaggaatttggttgctgcttgggacaagaggttggctacaccattaggttt
gaggactgcaccagccctgagactgtcatcaaatacatgacagatggcatgttactgaga
gagtgcctgatagacccagatctcacccagtatgccatcatcatgctggatgaggcccat
gagaggaccatccatacagatgtgctctttggcctcctgaagaagacagtgcagaaacgg
caggacatgaagctgatagtgacatcagcaactctggatgctgtgaaattctctcagtat
ttctatgaagcaccaatcttcacaattcctggcagaacatacccagtagaaattctgtac
acaaaagagccagagacagattatttggatgccagtctgattacagtaatgcagatccat
ttaacagagccaccaggtgacattttggtctttctaactggccaggaagagattgacact
gcctgtgagatcctctatgagaggatgaaatctctaggacctgatgttccagagttaatt
atcctaccagtgtattcagcattgcccagtgaaatgcagaccaggatctttgacccagcc
ccaccagggagcagaaaggttgtcattgccaccaacattgcagagacatctttgaccatt
gatggaatatattatgtggttgatcctggctttgtgaagcagaaagtttataactccaag
actggaattgaccagctggtggtgacaccaatttcccaggctcaggccaagcagcgtgca
ggcagggctggcagaacaggcccaggaaaatgctacaggctgtacacagaacgtgcctac
agagatgagatgctaaccaccaacgtgcctgaaatccagaggacaaatctggccagtaca
gtgctctccctgaaggctatgggcatcaatgatttgctgtcctttgacttcatggatgct
ccccccatggaaactctcattactgccatggagcagctctacaccctgggagctctggat
gatgaggggctgctcactcgacttgggcgtaggatggcagaattccccctggagcccatg
ctgtgtaagatgttgatcatgtctgtgcatctgggatgcagtgaggagatgctgacaatt
gtgtccatgctgtctgtgcagaatgtgttctacaggccaaaggataaacaagcacttgct
gatcaaaagaaagccaagttccatcaaacagaaggtgaccacctcactctgctggctgtg
tacaattcctggaagaacaataagttttcaaacccctggtgctatgaaaatttcatccag
gcccgctccttacgccgggcccaggacattcgcaagcagatgttgggcatcatggacagg
cataagctggatgtggtgtcctgtggaaaggccacagttcgggtccagaaggcaatttgc
agtggcttcttcaggaatgcagccaagaaggatccccaggaggggtacaggacactcatt
gaccagcaggttgtctacatccacccatccagtgctctcttcaacaggcagcctgagtgg
gtggtgtatcacgagctggtgctgaccaccaaggagtacatgagggaggtgacgaccatc
gatcctcgctggctggtggagtttgccccagctttcttcaaggtctctgacccaaccaag
ctgagcaagcagaagaagcagcagaggctggagcccctctacaaccgctacgaggagccc
aacgcctggaggatctctcgcgccttccgccgccgctga
DBGET
integrated database retrieval system
