Serinus canaria (common canary): 103821751
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Entry
103821751 CDS
T05755
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
scan
Serinus canaria (common canary)
Pathway
scan03013
Nucleocytoplasmic transport
scan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103821751 (CASC3)
03015 mRNA surveillance pathway
103821751 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103821751 (CASC3)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103821751 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
103821751
NCBI-ProteinID:
XP_018776910
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MADRRRQRASQDSEDSEGSFHVARTWLLPSPPLTPLTFLSLQESEDGIEGDAVLSDYESA
EDSEAEEEDYSEEESSKVELKQDSNDSCESAARGEKGNEKVDPKGAVTGERQSGDGQEST
EPVEKKVGKKVPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDE
GRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSN
ERPPKPPRHQGAKSPLAPPRSFNSRSSASTGRMPPARNYPRMGGYKETRPGYRASEATVL
HRNGEQAKQEGGYRGKHAEQSPSRDTSPELEVGHVHGSPGKEEGALENQATGADAVQPPP
DRPVEKKSYSRARRTRVKAGEAGKLAEEVPASEGLAPVIPKPTPAETSPPPAKSNWESPV
ESSVDGLGQEMTQMNLTEQNWSPGQSQFIPPRELRGIPNHVHVGTGPPPQFNRMEEMAVP
GGRVKRYSSQRQRPPVPEPAPPMHISIVEGHYYDPLQFQGPIYAHGENPAPLPPQGMIVQ
PEMHLPHPGLHPHQTPPAMANPGLYPPPVSMPPGQPPPQQLLTPTYFSAPGVMNFGNPGY
PYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPP
EDSKGEKSKERSNT
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacagcgagggctcgttc
catgttgctaggacctggctgctgccctcccctcctctaacacccctcacttttctctct
ctgcaggaaagtgaggatggcatcgaaggagatgccgtgctctctgactacgaaagcgcc
gaggactcggaggcagaggaagaggattacagcgaggaagaaagctccaaggtggagctg
aagcaggacagcaacgattcctgcgagtcggcggccagaggggagaaggggaatgagaag
gtggatcccaagggagcggtgacgggcgagcggcagagcggggacgggcaggagagcacg
gagcctgtggagaagaaagttgggaagaaggttcccaagcatctggatgacgatgaggat
cggaagaacccggcgtacatcccacgcaaggggctcttctttgagcatgacctccgaggg
cagacgcaggaggaggaggtcaggccaaagggtcgtcagcggaagctgtggaaggacgag
gggcgctgggaacacgacaagttccgtgaggatgagcaggcccccaagaccaggcaggag
ctgattgctctgtatggatatgacatccgctcagcccacaaccccgacgacatcaaaccc
cgcaggatgcgcaagccacggtttggcagtccccctcagcgagaccccaactggtccaac
gagaggccccccaagcccccaaggcaccagggtgccaagagccccttggctcctccacgg
tccttcaacagccgcagctctgccagcactggcaggatgccccctgccaggaactacccc
aggatgggtggctacaaggagacccgtccaggctaccgggcttcagaggccactgtcctg
caccggaatggggaacaagccaagcaggagggtggctaccgtgggaagcatgcagagcag
agcccatcaagggacacgtcccctgagttggaggtgggacatgtccatggcagccctggg
aaggaggagggggctctggaaaaccaagccacaggtgctgatgctgtgcagccaccaccg
gacagaccagttgagaagaaatcttattcccgggcaagaaggaccagagtcaaggctgga
gaggcagggaagctggcagaggaagtgcctgcttctgaggggctggctcctgtgattcca
aaacctacgccagccgagacctcccccccaccagccaagagcaactgggagtcaccagtg
gaatccagtgtggatggacttgggcaggagatgacccagatgaacctgacagagcagaac
tggagcccggggcagtcccagttcatcccaccccgggagctgaggggtattcccaaccat
gtgcacgtgggaactgggccaccaccgcagttcaaccggatggaggagatggcagtgccg
ggggggcgtgtgaagcgctactcatcgcagcggcagagaccccccgtgccagagcccgcg
ccccccatgcacatcagcatcgtggaagggcactactatgacccactacaattccaggga
ccaatctacgcccacggtgagaacccagccccgctgccgccccaagggatgattgtgcag
ccggagatgcacctccctcatccaggtttacacccccaccagacgccccctgccatggca
aaccccggcctgtaccccccaccagtgtccatgcccccggggcagcccccgccgcagcag
ctgctcactccgacttacttctctgcccctggagtgatgaattttgggaatcctggctac
ccctacccccctggagctctgccccctccgccccctcctcatctctattccaacacgcag
gcgcagtcccaggtgtatgggggggtcacctactacaacactgtccagcagcaggtgcag
cccaagccctccccgccccgccggacgtcccagcctgtgaccatcaagccaccccctcca
gaggacagcaaaggtgaaaaatcaaaggagaggagcaacacgtag
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