Serinus canaria (common canary): 103824438
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Entry
103824438 CDS
T05755
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scan01002
]
103824438 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scan04121
]
103824438 (USP47)
Enzymes [BR:
scan01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103824438 (USP47)
Peptidases and inhibitors [BR:
scan01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103824438 (USP47)
Ubiquitin system [BR:
scan04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103824438 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
103824438
NCBI-ProteinID:
XP_009097953
LinkDB
All DBs
Position
Unknown
AA seq
1351 aa
AA seq
DB search
MKKKFSQAECAAEEPRVLCIIQDTTNSRRVNERVTLNLPASTPLRRLFADVAAKVGYVNG
SFDLVWGNGDSATDTTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQPHVMQEESGTTE
DGAQERFIGPLPREGSIGCTHDYVSQSYSYSSVLSKSETGYVGLVNQAMTCYLNSLLQTL
FMTPEFRNALYKWEFEESEEDPERSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSE
AWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGYEGWRIDTYLD
IPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLL
TLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESCTDSGAENEGSCH
SDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMVHSGSAAGGHYYA
CIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDP
ARNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCMHPTKQIMMENKL
EVHKDRTLKEAVEIAYKLMDLEEAVPLSCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGG
VKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHVVDLKTESVAPPISVRAYLNQTVSEFK
QLISKATHLPAETMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFIESSECSDRHVTY
TDSQLWKLLDRHANTIRLYVSLPEQAPGSQLRRALYQKSAGAAGNLEEPCERVKGPVGNM
KSVEAILEESTEKLKSLSLQQQQQQEGDNGDSSKSTEASDFENIESPLNEIDSSASAENR
ELDNQIQISDPENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNVDNAPLPLANG
LDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYFKSEPYTAEEG
SGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEFESVRLNETLSSF
SDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQSKEELLPQLR
EQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILDGVEKMKSMSQ
LAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEFAKGRGTFPCDIS
ILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNELMKKESSRLQ
KTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagttttcacaggcagaatgtgctgccgaggagcccagggtgctgtgtata
atccaggacaccaccaattccaggagggtgaacgagcgcgtcaccctgaacctgcccgcc
tccaccccgctgcgccggctctttgcagacgtggctgccaaagtgggctacgtgaacggc
tcctttgacctggtctggggcaatggagacagtgccactgacacgactccaatagatcag
aacagtgacaaaaccattcttgatgctggttttgagccagggaaaaagaactttctgcat
ttgacagacaaggatggtgagcagcctcacgtaatgcaggaggagtcaggtacaacagag
gatggtgcacaggagagatttataggcccccttccaagagaaggctccattggatgtacc
catgactatgtcagtcaaagctattcttattcttcagtcctgagcaaatcagagacaggt
tatgtggggctggtaaatcaagcaatgacttgctacttgaacagccttctgcaaacactt
ttcatgactcctgaatttagaaatgcattgtataagtgggaatttgaggaatctgaagag
gaccctgagaggagtatcccctaccagctacaaagactgtttgttttactgcagaccagc
aaaaaaagggcaattgaaacaacagatgttacccggagttttggatgggacagtagtgaa
gcatggcagcagcatgatgtgcaggagctttgtagagtcatgtttgatgctttggagcag
aaatggaagcaaacggagcaggctgatcttataaaccagctgtaccaaggcaaactgaag
gactatgtgaggtgcctggagtgtggctatgaaggctggagaatcgacacgtacctggat
atccccctggtcatccggccctatggctccagccaggcctttgctagcgtggaagaagca
ctgcatgctttcattcagcctgagatccttgatggcccaaatcagtacttttgtgagcga
tgtaagaagaaatgtgatgcaagaaagggtctgcggttcttgcacttcccgtacctgctg
acgttacagctgaagagatttgactttgattataccacaatgcacagaattaaactcaac
gatcgcatgacgtttccagaggagttggacatgagtgtctttattgatgttgaagatgag
aagtctcctcagaccgagagttgcactgacagtggagctgaaaatgaaggcagttgtcac
agtgatcagatgagcaatgatttttctaatgatgatggagttgatgaaggaatctgcctt
gaaagcaatagtgcagcagagaggatctctaaagctggcagtgaaaagagttctttgttg
tatgagctcttctctgtcatggttcattctggaagtgctgctggtggccattattatgcc
tgtataaaatcttttagtgatgatcagtggtacagctttaatgatcagcatgttagcaag
ataactcaggaagatattaagaaaacatatggaggatcttctggaagcagaggatattat
tccagtgcttttgctagctccacaaatgcttacatgctgatatacagactgaaagatcca
gcaagaaatgcaaagtttcttgaggcacatgaatatccagagcacattaaacaattggta
cagaaagagagagaattagaagaacaagagaagaggcagcgtgaaattgagcgcaacacg
tgcaagattaaattattctgcatgcatcctacaaagcaaataatgatggagaacaaattg
gaagttcataaggacagaacactgaaggaagctgtggaaatagcttacaagctgatggat
ttagaagaggctgttcccttgagctgctgtcgccttgtcaaatacgacgagttccatgac
tacctggagcgctcctatgaaggagaagaggatacccccatgggtttgttacttggaggg
gtcaagtcaacctacatgtttgacttactgttggaaacaagaaggcctgaccaagttttc
cagtgctataaacctggtgaggtcatggtaaaggttcatgtagtggacctgaagactgaa
tctgttgctcctccaataagtgtgcgagcttatttgaatcaaacagtttcagagtttaaa
cagctaatttcaaaggccacgcacctgcctgctgagaccatgcgggtggtgctggagcgc
tgctacaacgacctgcggctgctgaacgtgtccagcaaaacactgaaagctgaaggcttt
tttagaagcaacaaggtgttcattgaaagctcagagtgctcggaccgccatgtgacatac
acagactctcagctgtggaagctgctggatcgccacgcaaacaccatcagactgtacgtt
tcattgccagagcaagctcctggctctcagctcagacgggctctttatcagaagtctgct
ggggctgcaggcaacttggaggaaccttgtgagagagtaaaaggacctgtaggtaatatg
aaatccgtagaggcaattttggaagaaagcactgaaaaacttaaaagcttgtccctgcag
caacagcagcagcaggagggagataatggagacagcagcaaaagcacagaagccagtgat
tttgaaaacattgagtcgcctttaaatgaaatagactcttcagcatcagcagaaaacaga
gaactcgacaaccaaattcagatttctgatccagagaatctgcagtccgaggagcggtca
gactcggatgtcaataacgacaggagtacgagttcagtggacagtgacatcctgagctcc
agccacagcagtgacactctgtgcaacgtggacaatgcccccctgcccctggccaacggg
ctggactctcacagcatcacgagtagcaggcgatcaaaggccaatcagggcaagaaggaa
acgtgggacacagcagaagaggattctggaacagacagtgaatatgatgaaagtggcaag
agcagaggggaagcgcagtatatgtactttaaatcagagccctacactgcagaggagggt
tcaggagaagggcagaaatggttgatggtgcatgttgataaaagaattacactgtctgcc
ttcaagcaacacttggagccttttgttggagttccatcttctcacttcaaagtgtttaga
gtctatgccagcaatcaagagtttgagagtgttcggctgaatgagaccctttcatcattt
tctgatgacaataagataactattagacttggaagagcccttaagaagggtgaatacaga
gttaaagtctatcagctcttggtaaatgagcctgagccctgcaagttccttctagatgca
gtttttgctaaaggaatgactgtccgacagtccaaagaggagctgcttcctcagcttcga
gaacaatgtggcctagacttgacaattgacaggtttcgcctacgaaagaaaacttggaag
aatccaggcactgtgtttctcgattatcatatctatgaagaagatatcaatatttccagc
aactgggaggtcttcttagaaatacttgatggagtagaaaagatgaaatccatgtcacaa
cttgctgttttatcgagacgatggaggccgtcagagatgaaattggattctttccaggaa
gtagtactagaaagcagcagtgttgaagaattaaaagagaagctaagtgaaataagtgga
atacccttagaaaacattgaatttgcaaagggcagaggaacctttccctgtgacatttcc
atactagagattcatcaagacttggactggaatccaaaagtatctacattgaacgtctgg
cccctgtacatttgtgatgatggtgcagtaatattttatagggataaaactgaagaatta
atggaattaacagatgagcaaagaaatgaactgatgaaaaaagaaagcagcagactccag
aaaactggacaccgggtaacctactctccccgtaaagaaaaagcactaaaaatttatctg
gatggagcaccaaataaagatttgactcaagactga
DBGET
integrated database retrieval system
