Streptomyces scabiei: SCAB_65661
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Entry
SCAB_65661 CDS
T01187
Name
(GenBank) putative ribonuclease
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
scb
Streptomyces scabiei
Pathway
scb00860
Porphyrin metabolism
scb01100
Metabolic pathways
scb01240
Biosynthesis of cofactors
scb03030
DNA replication
Module
scb_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
scb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
SCAB_65661
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCAB_65661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scb03032
]
SCAB_65661
Enzymes [BR:
scb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
SCAB_65661
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SCAB_65661
DNA replication proteins [BR:
scb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SCAB_65661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_Phos_1
RVT_3
RNase_H
Motif
Other DBs
NCBI-ProteinID:
CBG73568
UniProt:
C9ZFS8
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All DBs
Position
7255384..7256862
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AA seq
492 aa
AA seq
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MREFIVEADGGSRGNPGPAGYGSVVLDAVTGETLVEAAEYIGVATNNVAEYRGLIAGLKA
AYELDPEASVRVRMDSKLVVEQLSGRWKIKHPDMKPLAAEAARVFPPGRVTYEWMPREQN
KHADRLANEAMDAGKRGEQWSPAASTADLDTRASRSAAAAAPEPSGPPGDATAGAALARA
ALAGSKGKPTSTGGRTGTDSSGGGRSAGADSSDGGRSAEPPSDGGSRSAGARTPGTGDGS
RSTAHGPRTTADGPRTSTTAAVDATSAAAADLRAAKNVASVAPDLGTPATFVLLRHGETP
LTPQKRFSGSGGSDPSLSEVGRYQAERVAAALAARGTIQEVVSSPLARCRETAGIVAARL
GLGMTVEDGLRETDFGAWEGLSFGEVRERYPDDMNAWLASPDAEPTGGGESFAAVAHRVA
ATRDALAAAHRGRTVLLVSHVTPIKTLVRLALGAPPESLFRMELSAASLSALAYYADGNA
TLRLLNDTSHLR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggagttcatcgtcgaggccgacggcggttcccggggcaacccggggcccgcgggc
tacggctccgtcgtcctcgacgcggtgacgggcgagacgctggtggaggccgccgagtac
atcggcgtcgccaccaacaacgtcgccgagtaccgcgggctcatcgcgggcctgaaggcg
gcgtacgagctggacccggaggcgtccgtccgggtccggatggactccaagctggtcgtc
gagcagctgtcgggccgctggaagatcaagcaccccgacatgaagccgctcgccgccgag
gccgcacgggtcttcccgcccggccgcgtgacgtacgagtggatgccgcgggagcagaac
aagcacgccgaccggctggccaatgaggcgatggacgccggcaagcgcggcgaacagtgg
tcgcccgccgcgtccaccgcggacctggacacacgcgcgtcccggtccgccgcggccgcc
gcacccgagccgtccgggccgcccggcgacgcgacggcgggcgcggcgctggcgagggcc
gcgctggcgggatccaaggggaagcccacgtcaaccgggggcaggaccggcaccgattcc
tctggtggcggccggtctgccggcgccgattcctccgatggcggccgttccgccgagccc
ccgtccgatggcggcagccgatccgccggggcccgcaccccaggcactggcgacggctcc
cgaagcacggcccatggcccccgcaccaccgccgacggcccccgcaccagcaccaccgcc
gccgtcgatgccacctccgctgccgccgctgatctccgggccgccaagaacgtcgcctcc
gtcgcccccgacctggggaccccggccaccttcgtgctgctgcggcacggcgagacgccg
ctcaccccgcagaagcggttctcggggagcggtggttcggatccgtcgctctccgaggtc
ggccggtaccaggccgagcgggtcgccgccgcgctcgccgcgcgcggcacgatccaggag
gtcgtgtcgtcgccgctggcccgctgccgcgaaacggcgggcatcgtcgccgcccggctc
ggcctcggcatgaccgtcgaggacgggctgcgggagacggacttcggcgcatgggaaggg
ctgagcttcggtgaggtgcgggagcggtacccggacgacatgaacgcctggctggcctcc
ccggacgccgaacccaccggcggcggcgagagcttcgctgccgtcgcgcaccgcgtcgcc
gccacccgcgacgcactggccgcggcccaccggggccggaccgtcctgctcgtcagccac
gtcacgccgatcaagaccctcgtccggctggcgctcggcgcgccccccgagtccctcttc
cgcatggaactctcggcggcatccctgtcggccctggcctactacgccgacggcaacgcc
accctccgtctcctcaacgacacctcacacctgcgctga
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