Gracilinema caldarium: Spica_0529
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Entry
Spica_0529 CDS
T01573
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
scd
Gracilinema caldarium
Pathway
scd00521
Streptomycin biosynthesis
scd00523
Polyketide sugar unit biosynthesis
scd00541
O-Antigen nucleotide sugar biosynthesis
scd01100
Metabolic pathways
scd01110
Biosynthesis of secondary metabolites
scd01250
Biosynthesis of nucleotide sugars
Module
scd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Spica_0529
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Spica_0529
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Spica_0529
Enzymes [BR:
scd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Spica_0529
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AEJ18691
UniProt:
F8F038
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All DBs
Position
573594..574142
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AA seq
182 aa
AA seq
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MPINVTPLPIEGLYIIEPRVFGDARGYFFESYNERDFNTAGLTMRFVQDNQSFSRMGVLR
GLHFQKQHPQGKLVRVIQGEVYDVAVDIRPGSKTYGQYHGLILSSEKQNQFYIPPGFAHG
FVVLSETAIFAYKCTDYYHPEDEGGIRWDDPDLSIPWPLKEVQVSPKDAQLPYLKDIKKE
NL
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaatgtcacacccctccccatagaaggactttatatcattgagccccgggtg
tttggcgacgctcggggctattttttcgagtcctacaacgaacgggattttaacactgcg
ggccttaccatgcgctttgtccaggataaccaatccttttccaggatgggcgtactgcgg
ggcctccatttccagaaacagcacccccaggggaaactcgtccgggtaatacagggcgaa
gtctacgatgtcgccgttgatatccgacccggttcaaagacctatggccagtaccatggc
cttatactaagcagcgaaaagcagaaccagttttacattcccccaggttttgcccatggt
tttgtggtcctctccgaaaccgccatctttgcctataaatgcaccgactactaccacccg
gaagacgaaggaggcatccgctgggatgatcctgacctctccatcccctggccccttaag
gaggtgcaagtttctcctaaagatgcacaattgccctatttaaaagatattaaaaaggaa
aatctatga
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