Gracilinema caldarium: Spica_1933
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Entry
Spica_1933 CDS
T01573
Name
(GenBank) Glycoside hydrolase, family 20, catalytic core
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
scd
Gracilinema caldarium
Pathway
scd00511
Other glycan degradation
scd00520
Amino sugar and nucleotide sugar metabolism
scd00600
Sphingolipid metabolism
scd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Spica_1933
09103 Lipid metabolism
00600 Sphingolipid metabolism
Spica_1933
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Spica_1933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
scd03110
]
Spica_1933
Enzymes [BR:
scd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
Spica_1933
Chaperones and folding catalysts [BR:
scd03110
]
Intramolecular chaperones
Others
Spica_1933
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Motif
Other DBs
NCBI-ProteinID:
AEJ20062
UniProt:
F8F443
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Position
complement(2145388..2147202)
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AA seq
604 aa
AA seq
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MAAYASVPAIIPKPAFYQETGDRLYAATLTLDGDSFFLPQLRALRDEIITAFGETVLSPL
SSAEEFAYFEQQTHDETPLWGANFRRDAAPTIALHIHQVDERSWVEQARMHGSELADGVG
AVVWGAYLLTISPSGIEMVIPRTAGRNTMVESAAAAFATLMQLLHLGWDGWRFKLPVCTI
VDRPALAWRGLMIDSARHFVPVPELKKILSMAWLYKLNRFHWHLTDDQGWRLELVTLPEA
TGSGSTRPGGDPNRNGYYTQEEVRDIVAFAGDRGITVIPELDLPGHVQAILAGHPEFACT
PGPHYVRTEWGISEDVLCMGNPAALNFALKAWDEVCELFPGPYVHIGGDEVPTTRWESCP
KCAAKKAELGLTDWIDLHGYFVATIAEHLSKKGKIVFGWDEVLDSSIPNLANVVHWRAWI
PEQSTKALSQGRWLVRSPYFPYYLDFVQTDDRSISPGLAYRNPDAASLRRIYEYDPFEEI
EPDIPESVSGTETAQCSASGREAYLEGVPEQDAGQGRALENASLDRSGRFLGIQANAWTE
YIRDGRRLEYMLFPRLLALAETAWNGRTRSSYEDFLRRLEAGHCGSSRGIFAQRGINFCP
LYKD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctatgcatctgtgccggcaataatccccaagccggcgttttaccaggaaacc
ggagacaggctgtatgccgctaccctgaccctcgacggcgattcgttttttctgccccag
ctccgggctcttcgggatgaaattataacagcctttggcgagacggttctgagtccctta
agttctgctgaggaattcgcctacttcgaacagcagacccatgacgaaactcccctctgg
ggtgccaatttcagacgggatgccgctcctacgattgcccttcatattcatcaggttgat
gaacgaagctgggtggagcaggcccgcatgcacggttcagagctcgcggatggtgttgga
gcagtggtctggggagcctatctgcttacaatttccccttctggaatagaaatggtaatt
cctcgcacagcaggacgcaacaccatggtagaaagcgccgctgcagccttcgcgaccctg
atgcagctgctccacctgggatgggacggctggcgtttcaagcttccggtctgtaccatt
gtggacagaccagcacttgcatggcgggggctcatgatagattctgcccgtcactttgtg
ccggttcctgaacttaaaaaaatcctcagcatggcctggctttataagctgaaccgcttt
cactggcaccttaccgatgaccagggctggcgactggagcttgtaaccctgccagaagcc
actggttccggttccacaagacccggcggcgatccgaaccggaacggctattatacccag
gaagaggtccgggatattgtggcctttgcaggggatcggggaattacggtgattcccgaa
ctggacctgcccggccatgtccaggcaatcctggcaggacacccggagtttgcctgtaca
ccggggccccattatgttcggaccgaatggggcatttcggaggatgtactctgtatggga
aaccccgccgccctaaattttgccctgaaagcctgggatgaggtctgcgaactctttccg
ggcccctatgtccatatcggcggtgatgaagtgcccaccacccggtgggaaagctgtccg
aaatgcgctgcaaaaaaagcagagctgggtcttacagactggatcgatctgcatggttat
tttgtggcaaccattgcagagcacctgagcaaaaagggaaaaatagtctttggatgggat
gaggtgctcgactcatcaatcccgaacctggccaatgtggttcactggcgggcctggatc
ccagaacagtcgactaaggccctttctcaaggccgctggcttgtccgcagtccttatttt
ccctattacctagattttgtgcaaaccgatgatcgcagtataagccctgggcttgcctac
cgtaatcccgatgccgcgagcctccgccgcatctatgagtacgacccctttgaggaaatt
gaaccggatatccctgagtctgtatcgggaacggaaacggcccagtgcagtgcatcggga
agagaagcgtacctggaaggtgtaccggaacaagatgcaggccaggggagagcgcttgaa
aatgcatccctggaccgaagcggtcgtttcctgggcatacaggctaacgcctggaccgaa
tacatccgggatggccggcggcttgaatacatgctctttccccggctccttgctctggca
gagaccgcctggaacggcagaacccgcagttcctatgaggacttccttcggcggctggag
gctgggcactgcggttcgagccggggaatttttgcccagcggggcatcaatttttgcccc
ctgtataaagactga
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