Gracilinema caldarium: Spica_1961
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Entry
Spica_1961 CDS
T01573
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
scd
Gracilinema caldarium
Pathway
scd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spica_1961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scd03400
]
Spica_1961
Enzymes [BR:
scd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spica_1961
DNA repair and recombination proteins [BR:
scd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Spica_1961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecG_wedge
DEAD
Helicase_C
RecG_dom3_C
ResIII
SecA_DEAD
AAA_30
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEJ20090
UniProt:
F8EXS6
LinkDB
All DBs
Position
complement(2179513..2181627)
Genome browser
AA seq
704 aa
AA seq
DB search
MFLKEIHTPIHHLKGAGSQTCQALARLGIRDIASLLSYYPRDWEDRSRIIPLSQWNKAKQ
VYTVVTVLAHEWFGYPKKTLKVHIEDDTARAELICFNRPFLEKQLEVGKSYLVWGQFSYR
FGSLQSSSFEFEHADRVQKTAEFLFLPIYPLTAGLSQKILRRLVYQALQLYGKSLEDELP
GSVLQQQALLDKTKALGAIHFPKNKDELEAAQRRIKYEELFYLEVLIGRRALERQNTLRR
TPAPAQGQTQAQSQELEDKLSPLQKRLAERLPFELTKGQINAITEINRDMSGPHSMARLL
QGDVGSGKTLVSFMAALRALEEGGQTALLAPTELLARQHAENAAKILEPLGVSVAFLTGN
VKAAGRSALLKALAAGNIHLVIGTHALFSAGLQYHKLRLVIIDEQHRFGVLQRSAILAKG
DNPDLLMMSATPIPRTLALTVFGDLDVSVISDLPPGRKPVKTHLARQSNEQKVYDFVRKE
LQAGHQAYFVYPLIEGDSDRSDQNNLKNAEAMAKRLSQEVFPEYNVALVHSRLDEEQKRL
TMNAFRTGQIQILVATSVVEVGVDVPNATCMVVEHAERFGLSALHQLRGRVGRGPAQAYC
FLVYSDRLTEDGKQRLKVMLEHNDGFRIAEEDLKLRGPGQIAGIEQSGYLSLGLADPILD
ASLLETARGDAFTILKQDPGLLEPGHIVIRQVLERASPFTQVAL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgttcctcaaggagatacatactcccattcatcatctgaaaggggctggcagtcagacc
tgtcaggcgcttgctagactcggtatcagagatatcgcttccctattaagctattacccc
agagactgggaggatcggagccgtattatacccctttctcaatggaacaaggcaaaacag
gtttatacggtagtcacagtcttagcccatgaatggtttggctatcccaaaaaaacactc
aaagtccatatagaagatgacacggcccgggctgaactcatctgttttaaccgccccttt
ttagaaaaacagcttgaggtaggcaaaagctatctagtctgggggcagttttcataccgc
tttggaagcctccaatcatcgagttttgaatttgagcatgcagacagggttcaaaagact
gctgaatttctcttcttaccaatctatccacttaccgccgggctttcccaaaaaatactc
agacgtcttgtctatcaagctcttcaattatacggaaaaagtctcgaagatgaactccct
ggatcagtgctacagcaacaagctttattggacaaaacaaaggccctgggggccattcat
tttcctaagaataaagatgaactcgaagccgctcaacgacgcataaaatacgaagagctt
ttttatctcgaagttcttattggccgtagggccctggaacggcagaataccctcaggcgg
actccggctccagcccaaggccaaacgcaggcccaaagccaagaattggaagacaaactc
agccccctgcagaaacgtctggcagaacggcttccctttgaactcaccaaagggcaaatc
aatgctattacagaaattaatagagatatgtcaggtccccattccatggctcggcttcta
cagggagacgtcggttccgggaaaaccctggtctcttttatggctgccctcagagccctt
gaagagggcggacaaacggcgctgcttgctccaaccgaacttttggctcgacagcatgca
gaaaatgctgcgaaaattcttgaacccctgggtgtatcggtagcttttttaacgggaaat
gtaaaagccgcaggtcgaagcgccctccttaaggcattggccgccggtaacatacatctt
gtcattggtacccatgccctcttttctgccggcttacagtatcataaactcaggctcgtt
attattgatgaacagcatcgctttggagtccttcagcgcagtgcgattctggccaagggg
gataatccggacctccttatgatgagtgctacccccatcccccgaacccttgctcttact
gtctttggcgatctggatgtatcagtcatttcggatcttcctcctggacgaaaaccggta
aaaacccatttggctcgacaatcgaatgaacaaaaagtgtacgatttcgttcgcaaagaa
ctacaggcagggcatcaggcatattttgtatatcctcttatagaaggggattcggaccgg
tcagaccagaacaatctgaaaaatgcagaggctatggccaaacgtttatctcaagaggtt
tttccagaatataacgttgcactggttcattcccggcttgatgaagagcaaaaacgcctg
acgatgaatgcatttcgtacagggcaaattcaaattctcgttgcaaccagtgtggtagaa
gtaggagttgatgtccctaatgcaacctgtatggtggtggaacatgctgaacggttcgga
ctctctgcattgcatcagcttcgaggccgggttggccggggccccgctcaggcctactgt
tttctcgtttactcagacaggctcaccgaagacggaaaacagcggctcaaagtcatgctt
gagcataacgacggcttccgtatagccgaagaggacctcaagctgcggggccccggccag
atagccggtattgaacaatccggttatctgagtctgggactggctgacccgattttggat
gcttcactcttagaaacagcccgtggggatgcctttacgattcttaagcaggacccggga
ttattagaaccgggacacatcgtcattaggcaggtattagaacgggcatcccccttcact
caagttgcactttaa
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