Saccharomyces cerevisiae (budding yeast): YBR237W
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Entry
YBR237W CDS
T00005
Symbol
PRP5, RNA5
Name
(RefSeq) DEAD-box RNA helicase PRP5
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YBR237W (PRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YBR237W (PRP5)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YBR237W (PRP5)
Spliceosome [BR:
sce03041
]
Complex A
U2 snRNP components
U2 related factors
YBR237W (PRP5)
Complex B
YBR237W (PRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
852539
NCBI-ProteinID:
NP_009796
SGD:
S000000441
UniProt:
P21372
Structure
PDB
LinkDB
All DBs
Position
II:691969..694518
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AA seq
849 aa
AA seq
DB search
METIDSKQNINRESLLEERRKKLAKWKQKKAQFDAQKEHQTSRNDIVTNSLEGKQTTEKF
TERQERVKEELRKRKNEFRKSDEPVSVKPSKKKSKRSKVKKKISFDFSDDDDSEIGVSFR
SKEHIQKAPEHDNEKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDV
EDNTDNSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVEELRLSL
DNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGIS
KTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSI
RSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRL
FDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFAVRVLHSPISITINSKGMVNENVK
QKFRICHSEDEKFDNLVQLIHERSEFFDEVQSENDGQSSDVEEVDAKAIIFVSSQNICDF
ISKKLLNAGIVTCAIHAGKPYQERLMNLEKFKREKNSILLCTEVLSRGLNVPEVSLVIIY
NAVKTFAQYVHTTGRTARGSRSGTAITLLLHDELSGAYILSKAMRDEEIKALDPLQAKEL
QEMSAKFESGMKKGKFRLSKGFGGKGLENIKSKREEAQNKDLELKKNDKRSDDLEKKISN
PREGHDSVSESSALIPRLNYELFKESTDGSIIFYAKVYINDLPQIVRWEATKNTTLLFIK
HETGCSITNKGKFYPEGKEPKNENDEPKLYLLIEGQDEKDIQLSIELLEQKVKEGVVKAA
SLSLKSTKY
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggaaactattgattcgaagcaaaatattaatagggagtctttattggaggaaaggagg
aaaaaactagcaaaatggaaacaaaaaaaagcacaatttgatgctcagaaagagcatcaa
acttcacgcaatgacattgttactaacagtttagaaggtaagcagactactgaaaagttt
acggaaagacaggaacgtgtaaaagaagagcttcggaagagaaaaaatgaatttaggaaa
tctgacgaacctgtatcggttaagccttcgaagaaaaagtcgaagagaagtaaggtaaag
aagaaaatatccttcgacttcagtgatgacgatgattctgaaataggagtttcttttaga
tcgaaggagcacattcaaaaagctccagagcatgataatgaaaaagatccactggatgag
tttatgacgtcattgaaggaggagaaaatgagtaatagtaaaggcatgtacgacagaggc
gacattcttgatgtagaggatcaattgtttgaacttggaggaaccgacgatgaggatgtt
gaagataatacggataattctaatatagcgaaaattgctaaactcaaagcaaaaaaacgt
gtaaagcaaatttattactctccagaagagcttgagccgttccaaaaaaatttttatata
gaatctgaaacagtttcctcgatgtcagagatggaagttgaggagcttagacttagtctg
gataatatcaaaataaagggaacaggttgccccaaaccagtcacaaagtggtctcaactg
ggactatcaacggacaccatggttttaattacagaaaagttgcactttggctccttaacg
cctattcaatcccaggctcttcccgctattatgtcaggtcgtgatgttataggaatatca
aaaactggctccggcaagaccatctcctatcttttaccattgctaagacaagtaaaagct
caacggccattatcaaaacatgaaacagggcccatgggtttaattctggctccaactaga
gagctagctttacaaatacatgaagaagttactaaattcacagaagcagatacatccatt
agatcagtatgctgtacaggaggttctgaaatgaaaaagcagattactgatcttaaaaga
ggcactgagattgttgttgccacaccgggacgatttattgatatattaacactaaatgat
gggaaattacttagtactaaaagaataacgttcgtagtaatggatgaggcagacaggctg
ttcgatttaggttttgaacctcaaataacgcaaatcatgaaaactgttcgaccggataaa
cagtgtgttctatttagtgcaacttttccgaacaaactacgcagttttgccgtaagagtt
ttgcattccccaatatctattacgattaattcaaagggaatggttaatgaaaacgtaaaa
caaaagtttagaatatgccattcagaagatgaaaaatttgacaatctggtgcagcttatc
catgagcgcagtgaattttttgacgaggttcaaagtgaaaatgacggacagtcaagcgat
gttgaagaagttgatgctaaagccattatatttgtatcaagtcagaatatttgcgacttc
atttcaaaaaagctgttaaatgctggaattgtgacctgtgctattcatgcaggtaagcca
tatcaagaaaggcttatgaacttagaaaagttcaaacgagaaaagaacagtattcttctc
tgtacagaggttctctcaagaggtttaaatgttcccgaagtgtcgttggttattatctat
aacgccgtcaaaactttcgcgcaatatgttcatactactggaagaactgccagaggtagt
cgctccggtactgctattactcttctattgcatgatgaactgtcaggtgcttatatcttg
agcaaggcaatgcgcgatgaagaaataaaagctttagaccctctgcaagcaaaagaactt
caggaaatgagtgccaagtttgaatccggtatgaaaaagggtaagtttaggttgtcgaaa
gggttcggcggcaaaggactggaaaatatcaaaagtaaaagagaggaagctcaaaataaa
gatttggagctcaaaaagaatgataagaggagcgatgacttggaaaagaaaatcagcaat
ccacgcgaagggcatgacagtgtgtctgagtcttctgcgcttattccgagactcaattat
gaactattcaaagagtctacagacgggtcgatcatcttttacgccaaggtttatattaat
gatttaccccagattgtaagatgggaggctacaaagaatacaaccttattatttatcaag
catgaaaccggatgtagtattactaacaagggtaaattttaccctgaagggaaggaacca
aagaatgaaaacgatgagcctaaactatacttattgatcgaaggccaagatgagaaagac
atacaattaagtatagaattgctggagcaaaaagttaaagagggggtcgtaaaggctgca
agcttgtctttgaagagtactaaatactag
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