Saccharomyces cerevisiae (budding yeast): YPL122C
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Entry
YPL122C CDS
T00005
Symbol
TFB2
Name
(RefSeq) TFIIH/NER complex subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03022
Basal transcription factors
sce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YPL122C (TFB2)
09124 Replication and repair
03420 Nucleotide excision repair
YPL122C (TFB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YPL122C (TFB2)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YPL122C (TFB2)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
YPL122C (TFB2)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
YPL122C (TFB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
bPH_7
DUF4369
Motif
Other DBs
NCBI-GeneID:
855981
NCBI-ProteinID:
NP_015203
SGD:
S000006043
UniProt:
Q02939
Structure
PDB
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All DBs
Position
XVI:complement(319226..320767)
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AA seq
513 aa
AA seq
DB search
MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL
DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS
FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG
EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID
ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR
EEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVL
SLFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKL
ELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGV
LLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactattccctgaagcattcggtcactcagtatttggaagaaattcctcaacaa
gttcaaaataggctttatacctcaccagctacatgtctggctatctatagaattttacca
ccactagctaaattttttatcatggcaatggttttcaacgaaaatgaagtacctttgttg
gatttagataaatgggttaactctaatggtaaattgcagtttcagaatgcaatcaaatcg
atgaagtctttgcatcttcttataccaaataaatcatctggtactttgatgatcaaccta
aacccaacattcaaaatcagcctgaggaacgcattaacgggtggggaagttcaaaactca
ttcggtgtggttgtagaggaaaacgtagttagcctggacttgttggatgaatattcagct
aataaatgggaaacaatattacatttcatggttggcactcccctcgctaaaatcccatct
gaaaaagtactgaaccttttaaaacacagtaaactaatggaagaggtaaactctactgga
gagttcaaaatcactaatgaaggcttccaatttcttttacaagaaatcaactcccaatta
tggacattattattgcaatatttaaaaatgatcgaaacgtccaaaatggatttagtcgat
gttttacattttattttcatgttaggcgcattggaagttggcaaagcctataaaatcgat
gcattaagcgaaacacaaagaattatgttacaagatatgcgagactatggtttggtattc
cagaagcattcaaatgatagcattttttatccaacaaaattagctttgatgctgacttcc
gataccaagacaatcagatctgcctccaatgcgatggatagtgtactgagacagaataga
gaagagccgtcagtaaatgaagacggcgccaacgggaaatccacaacagatatcactaca
tcagatgatttgaacaaagcaggtctaaaaaatcaagatatacccgatggctcattgatt
gtagaaacaaatttcaaaatctattcatattctaattcacctctgcaaattgctgttttg
tctctttttgttcatttaaaggcaagatttgtgaatatggtattgggtcaaataacaagg
gaatccataagaagagcattgaccaatggtatcactgccgaccaaatcattgcctatctg
gagacacatgcacatcctcaaatgagaaggttggcagaagagaaactagaaaaaaaatta
gagctggaccccaactgtaaggagcctttacaagttttgcctcctaccgtcgtagatcaa
atcagattatggcaattagagttagatagagtcattacatatgaaggttccttatattct
gattttgagactagtcaagaatacaacttactaagtaagtacgctcaagatatcggtgtt
ttgttgtggaaagacgacaaaaagaagaaatttttcatctcaaaggaaggtaattctcaa
gtacttgatttcgctaaaagaaagttgaaaaagaaacaataa
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